Zingiber officinale (ginger): 121996644
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Entry
121996644 CDS
T08725
Name
(RefSeq) rab9 effector protein with kelch motifs-like
KO
K20285
Rab9 effector protein with kelch motifs
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121996644
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121996644
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
121996644
NCBI-ProteinID:
XP_042406607
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Position
6A:76955797..76959809
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AA seq
635 aa
AA seq
DB search
MEEIAGRMEVVKRRKATWLYPKLAGYSPPERWGHSACFFDGVVYVFGGCCGGMHFSDVLA
LNLETMSWSSIATTGQKPGSRDSHSVVLVGHKMVVLGGTNGTKKVNDLHMLDLKTKEWSK
PTCLGTPPSPRESHTATVIGDEKLLIFGGSGEGEANYLNDVFLLDLKNMAWSSPAIKGEP
PAPRDSHTATSIGNKIFVYGGDCGDHFHGEVDVLDIDTMTWSRLEVKGSTPGVRAGHAAV
SIGTKAYIIGGVGDKQYYSDVWVLDTVSSSWAQLDILGDQQPQGRFSHSAVDINADIAIF
GGCGEDERPLNELIILQSGSEHSNGRYNVSMCKIFGNHWIQEKRKFLRTNLVQNNLVSKN
GLSSRGSTEVEPRNPLVCGLENMDSKRRKSTDAKVLEVELEQEEHSLSLSQHSSPSQSDQ
EQNIQKLPTAATDSLPPRLVTHPNPYNPTETVKIIHTRYLAGDEALRQPVTKQFLRTSLP
LPLPLPRQEASMLGAQQKYQLRPFFAPLSLQIGAEVRGTVDGAFDSGYLMTANVNGQLFR
GVLFAPVPVAAAPRPAINSQGMACSATVFQHPSTPHVIPIHARPPRQASACGLSDCGVVA
KQAQQVKVARTQPVKMANDLQDVVLTLGGPGNGVS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatagcggggaggatggaggtggtgaagaggaggaaggctacgtggctctac
ccaaagctcgccgggtatagccctcctgagagatgggggcactctgcttgcttctttgat
ggagttgtctacgtcttcggaggatgctgtggaggaatgcacttcagcgatgtccttgct
ctgaatctggaaaccatgtcctggagttccattgctaccacaggccagaagcctggaagt
cgagacagtcacagtgttgtgcttgtagggcacaagatggttgtattagggggtaccaat
gggacgaagaaggtcaatgatctgcacatgctagatctgaagaccaaagagtggagtaaa
ccgacttgccttggtactccgccatcgcctcgcgaaagccacacggccactgtcatcgga
gatgagaaacttctgatattcggtggcagtggtgaaggagaagcaaattacttaaatgat
gttttcctacttgatctaaagaacatggcatggtcttctccagcaatcaaaggagaaccg
cccgcaccaagggatagccacactgcaacttccatcggaaataagatttttgtatatgga
ggtgattgcggcgatcactttcacggtgaagtcgatgtgctcgacatagatacgatgact
tggtcgaggttggaagttaaaggatcaactccgggagtcagagctggtcatgctgctgtg
agcatagggaccaaggcatacatcattggtggagtcggcgataaacaatattatagcgat
gtttgggttctcgatacggtatctagctcatgggctcagctcgacatccttggtgatcag
caaccacaaggaagattttctcattctgctgtagacatcaatgctgatattgcgatattc
ggaggttgcggggaggacgaacggccgttgaatgagctgatcattttgcaatctggatct
gaacattcgaatggccgttataatgtttctatgtgcaaaatctttggcaatcattggatt
caagaaaagcgcaagttcttaagaaccaatcttgtgcaaaacaatctggtttcgaagaac
gggctatcaagtcgtggatcaactgaagtagagccaagaaatccactagtctgtggcttg
gagaatatggattccaaaaggaggaaatctactgatgccaaagtacttgaggtcgaacta
gagcaagaagaacattctctgtctctctcacaacattcttcgccgtcgcaatctgatcaa
gaacagaacatccagaaactaccaactgctgccaccgattccttgccccctcgattggtc
actcacccgaacccatacaatccaacagagactgtaaagatcattcacacacgatacttg
gccggcgacgaggctctgaggcagccagtgacaaaacagttcctccgaacatctctgcct
ctgcctctgcctctgccgaggcaagaggcttcaatgctaggagcacaacaaaaatatcaa
ctaaggcctttttttgcccccctgagcctacagatcggggctgaagttcggggaactgtc
gacggagctttcgattctgggtacctcatgactgcaaatgtcaacggccagcttttcaga
ggagtattgtttgctccggttccagttgctgctgccccaagacctgcaataaactcacag
ggaatggcttgctccgccactgtgttccagcatccttcaactccgcatgtcattcccatc
cacgcgaggccgccaagacaagcatctgcttgcggcttgtcggattgtggtgttgtggcg
aagcaagctcagcaagtgaaggtggctagaactcagccagtgaagatggcaaatgatttg
caagatgtagtcctcacgttgggaggaccaggcaacggtgtctcatga
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