Zingiber officinale (ginger): 121996683
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Entry
121996683 CDS
T08725
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121996683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121996683
03036 Chromosome and associated proteins [BR:
zof03036
]
121996683
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121996683
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121996683
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
121996683
NCBI-ProteinID:
XP_042406661
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Position
6A:79241603..79246463
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AA seq
351 aa
AA seq
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MEGGSSSATSFPKARGGAGGCLFSLGAPAFSGGQSASTSGSAGSPSSRSEIAAMTAASEN
TLVSLNHLDIHGDDAGTPKGAVSGKKKKRSARAVAGDKSGRGLRQFSMKVCEKVESKGRT
TYNEVADELVTEFANPPNNPGSNDQQQYDEKNIRRRVYDALNVLMAMDILSKDKKEIHWK
GLPRTSLNDIEELKAERVGLRSRIDKKTAYLQELHDQFVGLQKLVQRNDSLYGSGNLPSG
GVALPFILAQTRPHAMVEVEISEDMQLVHFDFNSTPFELHDDSYVVKAMGLCKREKSDGS
LTPCSNGGDGSSLMNASQNHTSPSSRANSMARVLASPPKPGILKSRVKNEH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggaagcagtagcgccacgagcttccccaaggcccgcggaggcgctggtggc
tgcctcttctcgctcggcgcgccggccttctctggcggccagtcggcctccactagcggc
agcgccggctctccctccagccggagtgagatagcggcgatgactgccgccagcgagaat
accttggtcagtctgaaccacctcgacattcacggggacgacgcggggacgcccaaagga
gccgtgagtggtaaaaagaaaaaaaggagtgctcgagctgttgcaggtgataaaagtgga
aggggacttcgtcaattcagcatgaaagtatgtgagaaagttgaaagcaaggggcgaacc
acttacaatgaggttgcagatgaacttgttactgaatttgcaaacccccccaataatcca
ggatctaacgatcagcaacaatatgatgagaagaacatacggcgaagggtatatgatgca
ctaaatgttctcatggctatggatattctctctaaggataaaaaggaaatacattggaaa
ggcttacctcgaactagtctaaatgacattgaagaattaaaggcagagcgagttggattg
aggagtagaattgataaaaaaactgcatatttgcaagaattgcatgatcaatttgtaggt
ctccaaaaattggtgcaaaggaatgatagtttatatggatcgggaaatctgccatctggt
ggcgttgctttgccctttatcttggctcagactcgtccacatgctatggttgaggtagaa
atatcagaagacatgcagcttgtacattttgacttcaacagtactccctttgagctacat
gacgattcgtacgtcgttaaagcgatgggattatgcaaacgagagaaaagtgatggttct
ttaacaccttgctctaatggaggtgatggttcgagcctgatgaatgcgagccagaatcat
acgtcaccatcttcgagggctaattccatggccagagtattagcttctcctccaaaacct
ggaattctaaaatcacgcgtgaagaatgaacattaa
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