Zingiber officinale (ginger): 121996817
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Entry
121996817 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1C-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121996817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121996817
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
121996817
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GFIT
Motif
Pfam:
Aa_trans
PPPI_inhib
Motif
Other DBs
NCBI-GeneID:
121996817
NCBI-ProteinID:
XP_042406870
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Position
6A:87712373..87732556
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AA seq
567 aa
AA seq
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MVEGGEMKNSVSDRNLFIESEDEEGDGVDQGEVRKARPSAAGDDSDGSDLSSEDGDSAPR
SRPGSYSTNWPQSYRQSMGMYSSISSPNIGFLGTPTLSRLSSSFISSSFRSAKHTPEIVA
SLIKPLLPTTVVDQQKQQHVEAETRRSSHSLLLPSRKPSLAKIQEKASHEFPISKNCSYG
QSVFNGINVLCGVGILSTPYAVKEGGWFGLSILLTFSVLAWYTGILLRYCLDSEEGLETY
PDIGQAAFGMIGRFVISIILYLELYACCVEYIILERDNLSSLFPNAQLDLGGLHMDSHLF
FAILTTLLVLPTTWLRDLSFLSYLSVAGVIASVLAVLCLFWVGAFDKVGFENTGTPLNLQ
GIPISIGIYGYCYNGHAVFPNIYSSLKKPSQFPMILFTCFAICTMMFVGAAVAGYAMFGE
STTSQFTLNMPQNLMASKIAVWTTVVNPITKYALTLTPLAMSLEELIPSRHMKTHLYPIM
IRTTLVLSTLCVALSIPFFGLVMALIGSLLTMLVSLILPCVCFLSILRDKVTRIQGLLCI
FIITIGAVSSVCGTISSVSKIIDKLNQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagggggcgagatgaagaactcggtgtcggatcggaatctgttcattgagagc
gaggatgaggagggcgatggagtcgaccagggcgaagtgcgaaaagcgcggccctcggcc
gccggagacgactccgacggctccgatttgtcttccgaggacggggatagcgcgccgcgt
agcaggcccggctcttactccaccaattggccccagagttacaggcaatccatgggcatg
tatagtagcatatcatcaccaaacataggattcttggggactccaactcttagcagatta
tctagctccttcatttcttcttcatttcggtctgccaaacacacaccggaaatcgttgca
tcactaataaagcctttgttacccaccactgtagtcgatcagcaaaaacaacaacatgtt
gaagcagaaacaaggcggagctcacactcattgctattgccctcaaggaagccatccttg
gcaaagatacaagagaaggcctctcacgaatttcctatctccaaaaattgttcctatgga
cagtcagtgttcaatggaattaacgtactatgtggcgttgggatcctttcgactccttat
gctgtcaaagaagggggatggtttggcctgtccatactgttaacattttctgtactggcc
tggtatactggcattctgctgcgctactgcttggacagtgaggaaggacttgagacatat
cctgatatcggacaggcagcctttggcatgataggccgctttgtcatctctataattcta
tacctggagttgtacgcttgctgtgttgagtatattatactagagagggataacttatca
tcattgtttccaaatgcacaattggatctaggcggactacatatggactctcatcttttc
tttgccattttaaccactcttcttgttcttcccacaacttggcttcgagatttaagtttt
cttagttatctatcagttgcgggagtcattgcgtcagtgttagcagtcctatgcttattt
tgggtgggtgcattcgataaagttggttttgaaaatactggaactccactaaatctgcaa
ggtattccaatttcaattggcatatatggctactgctataatggtcatgctgttttccca
aacatatattcctcactgaagaaacctagtcaattcccaatgattctctttacatgtttt
gcaatttgcacgatgatgtttgtgggggctgctgttgctggctatgctatgtttggggag
tcaactacatcacagttcaccctaaacatgccacagaatcttatggcttccaaaattgct
gtgtggacaacggtggtgaatccaattactaaatatgcattaactcttactcctctggct
atgagtttggaagagttgattccatcgcgccatatgaagacacatttatatccaattatg
ataagaacaacactagttctttctaccctgtgtgtggcgctctctatccctttctttgga
ttggtgatggctttgattgggtctttgctcaccatgcttgtatccttgattcttccttgc
gtttgctttttgagcattctacgcgacaaagtcacaaggattcagggtttgctgtgcatt
ttcatcatcacaattggagcggtttcttccgtttgtggtaccatctcatccgtctcaaag
atcatcgacaaattaaatcaatga
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