Zingiber officinale (ginger): 121996914
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Entry
121996914 CDS
T08725
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121996914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121996914
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
121996914
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Paralog
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GFIT
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
MCPsignal
FlxA
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121996914
NCBI-ProteinID:
XP_042407007
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Position
6A:91887742..91894100
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AA seq
329 aa
AA seq
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MSTRNRTPLYRKYRDALRSVRVPVASSLPSSSSAASSGGRAGPVIEMVSTSLLHPARSYA
PLSTEDPSNSSPAHLTVSLPPAWVDLSEEISVNMQHARKKMSDLVKAHEKDLMPSFGDGK
EDQHAIEVLTHDITYLLKKSEKQLMKISSSAPSGDSNIRKNVQRSLATDLQNLSMELRKK
QSLYLKRLREQKEGQDGFDLNMNMNGNRPTMEDDEFDDIGFSEHQMSQLEKNEAFTRERE
REIAQVVESVNELAQIMKDLSVLVIDQGTIIDRIDHNIQNVASSVEKGYKELHKAERTQR
KGGMVMCATVLVIMCFIMLVLLILKELLF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaggaatcggacgcctttgtacaggaagtaccgggatgcgcttcgcagcgtc
cgggttccagtggcgtcgtctcttccctcgtcttcctcggctgcttcttcaggaggacgc
gctggtcccgtgatcgaaatggttagcacttcgcttctccatcccgcccggtcttatgct
ccccttagcaccgaagatcccagcaattccagtccagctcatcttacagttagtttacct
ccagcttgggtggatctttctgaagaaatatctgtgaatatgcagcatgctcggaaaaaa
atgtcagatttggtcaaggctcatgaaaaagatttaatgccttcttttggggatggtaaa
gaggatcaacatgcaattgaggttcttacacatgatataacatatttgctcaagaaatcc
gagaaacaattgatgaaaatctcttccagtgcaccttctggagattccaatatcagaaag
aatgtccagagatcacttgcaactgatcttcagaacctatcgatggaactgagaaaaaag
caatcattatatttaaagcgcctcagagagcaaaaagagggtcaagatggctttgattta
aatatgaatatgaatggaaacagacctaccatggaagatgatgaatttgatgacatagga
tttagtgaacatcagatgtctcaactggaaaaaaatgaggcattcacaagagaaagggag
agagaaatcgctcaggttgtggaatcagtaaatgaacttgcacagataatgaaggatctc
tccgtccttgtgatagatcaggggacaatcattgaccgaattgaccacaacattcaaaat
gttgcttcctcagtggaaaagggctacaaagaattacataaggcagaaagaacacaaaga
aaaggaggaatggttatgtgtgcgacagttcttgtcataatgtgcttcattatgctggtc
ctcctaatactaaaggaattactcttttga
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