KEGG   Zingiber officinale (ginger): 121996956
Entry
121996956         CDS       T08725                                 
Name
(RefSeq) actin-interacting protein 1-2-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:zof04990]
    121996956
Domain-containing proteins not elsewhere classified [BR:zof04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121996956
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 Beta-prop_HPS5 eIF2A Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_SPT8 KNTC1_N Beta-prop_Vps41 WD40_CFAP43 DUF5711 WD40_like Beta-prop_WDR75_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 121996956
NCBI-ProteinID: XP_042407074
LinkDB
Position
6A:complement(93296099..93303262)
AA seq 611 aa
MAELKETYACVPSTERGRGILISGDPRTDTIAYCNGRAVIIRRLDAPMDVSIYGEHGYPT
TVARFSPNGEWVASADVSGTIRIWGRYGDRALKNEFRVLSGRIDDLQWSPDGLRIVASGD
GKGKSFVRAFMWDSGSTVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KLSQREHSNFVNCVRFSPDGSKFITVSSDKKGIIYDGKTGEKIGELSAEDGHKGSIYTLS
WSPDGKQIITVSADKTAKVWEITEDGGGKLTRTLINSGSSGGVDDMLVGCLWQNDHIVTV
SLGGTLTIFSATDPDKLPVSYSGHMKNISSLACILQSGQKVILSSSYDGIISRWIQGIGY
VGKLVRKGTTQIKCFAALDEEILTSAFDNKVWRVPLNGDQCGDTEPLDVGSQPKGLAVAA
KAPELALVSIDSGVALLQGSKVVSQIKLGHSVTTAAISPDGTEAIVGSEDGKLHIYSING
DTLSEEAVLEKHRGTITAICYSPDASMFCSGDSNREAVVWDRVSREVKLNNMLYHSARIN
CLAWSPDSHLIATGSLDTCVIIYELGKPASSRITIKGAHQGGVYGVAFIDENSLASAGED
ACVRVWTLTPQ
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcggagctgaaggagacgtacgcgtgcgtgccgtcgacggagcgcggtcggggaata
ttgatctccggggatccgcggacggacacgatcgcctactgcaatgggcgggcggtgatc
atccggcgcctcgacgcgcctatggatgtgtcgatctatggggaacacgggtacccgact
actgtggctcggttctcgcctaacggcgagtgggtcgcctcagctgacgtctccggcacc
atccggatctggggtcgatatggcgaccgcgcgcttaagaacgagttccgcgtcttgtcc
gggcgcattgacgacctccagtggtcgcctgacggcctccgcatcgttgcatccggggac
ggcaagggcaagtcgttcgtgcgggctttcatgtgggactcaggtagcactgttggcgag
ttcgatggccattcaagaagggtattgagttgtgcatttaagccaaccagaccattccgg
attgtcacatgcggtgaagatttcttggtgaatttttatgaagggcccccatttaaattc
aaactttcccagagggaacattcgaactttgttaattgtgtgcgtttttctcctgatgga
agtaagttcattactgtgagctctgacaagaaaggtataatttatgatggaaaaacagga
gaaaagatcggagaattgtctgcagaagatggacacaaaggtagcatatatactttaagc
tggagtcccgatggcaaacaaattatcacagtatctgcggataaaactgcaaaagtttgg
gagattacggaggatgggggtggaaaactgacaagaactttgattaattctggatcatcg
gggggagtggatgacatgcttgttggttgcctgtggcaaaatgaccatattgtcactgtt
tctcttggtggaacattgactatattctctgcaactgatccagataaattaccagtatca
tactctggacacatgaagaacatttcttctttggcctgtattctgcagagtggtcaaaaa
gttatcttatctagcagttatgatggtattatctctcgatggatccaaggcattggttat
gttggtaaattggtcagaaagggcactactcaaattaaatgttttgctgccctagatgaa
gaaattctgacctcagcatttgacaataaggtttggagagtacccctaaatggagatcag
tgtggggatacagagccactggatgttgggtctcagccaaagggcttagcagttgcagct
aaggctcctgaactagcattagtttcaattgactcaggagttgccctgttgcagggttca
aaagtggtttcacagataaaacttggtcattctgttacaacagctgcaatttcccctgat
ggaactgaggcaatcgtgggtagtgaagatggaaaacttcacatttatagtatcaacggg
gatactctatcagaggaagcagttcttgagaaacatcgtggaactattaccgctatatgt
tactcccctgatgcttccatgttttgttcaggagattccaatcgagaagctgttgtttgg
gatcgggtgtctcgagaggtgaagctgaacaacatgctgtaccattctgcacggataaat
tgcctagcctggtctcctgatagccatttgattgccactggctcactagacacttgtgta
ataatttacgaattaggcaagcctgcatcaagtcggattactatcaaaggagctcaccaa
ggaggggtttatggagtagctttcattgatgagaacagtttggctagtgcaggggaagat
gcttgtgtccgcgtgtggacattaacgcctcagtga

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