Zingiber officinale (ginger): 121997246
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Entry
121997246 CDS
T08725
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121997246
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121997246
Meiosis-specific proteins
Cohesin complex and associated proteins
121997246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
AAA_23
IFT57
ABC_tran
SbcC_Walker_B
DUF1664
Motif
Other DBs
NCBI-GeneID:
121997246
NCBI-ProteinID:
XP_042407502
LinkDB
All DBs
Position
6A:105514866..105547318
Genome browser
AA seq
1217 aa
AA seq
DB search
MPSILVPGKIHRLELENFKSYNGRQTIGPFSDFTAIIGPNGSGKSNLMDAISFVLGVRSA
HLRGSQLKDLIYAFDDSDKEKRGRSAFVRLVYLMANGAELQFTRAITSAGSSEYRIDGRA
VGWDEYNAKLKSIGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKKDYEDL
EEQKAQAEEKSALVYQEKRTIVMERKQKKAQKEEAEKHMLLQEELKSLKIEHFLWQLFNI
ENEMEKISDELDKEKKKLEEVLSLQKECDSEADMKKKEQAGYLKELSIREKKIAKLKLEL
DKKQPELLKLKEEKSRINSKIKSILKELEKKKKDQRKHAEEIVKLQKDLQDITEAIHELN
EQGKQGFGKLQLADDELSEYHRIKEEAGMKTAKLRDEKDVQDRQLHANIEVEQNLEENLQ
QLLNRERELSSQEDDSHKRLKQLSDSVTGYKKELEKLKKELSKITKDRQSSGSKYQSLKQ
KLDEVDLQLRELKADKHESERDARLSETVQSLKRLFSGVHGRMTELCRPSQKKYNLAVTV
AMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSIRVKPITEKLRNLGGTAQLVF
DVIQFDRSLEKAILYAVGNTLVCDKLDEAKALSWTGERYKVVTTDGILLTKSGTMTGGLS
GGMEAKSNKWDDSTIEALKKRKDQLESEMESLGSLRALQIKESETSEKITGLEKKIHYAK
IEEANIHEKLSKLTDEKHNIREEIDRLKPELQKLKTAIARRSEEIQKLEKRINTIVDRIY
KDFSESVGVKNIREYEEEQLKASQEMYERKLSLSNQMSKLKYQLEYEQKRDMKAPIAKLE
SSIDSLKEDLKDVKQKESNAEKAAAEITDQMKIIEEKADEWKVKSDACEDAIDELKKKSD
SFKGTIGKLERVINSKEARLEQLRSSKQEVLDKCELEQLKLPMANDGMEIESSGTQPVFD
YTQLRRTYLQEMRASERDKLELDFKQRMDNLMVEIERTAPNLKALDQYEALQEKEKEVID
KFEATRKEEKEISERYNSVRQKRYEHFMEAFDHISKSIDKIYKQLTKSQTHPLGGTAYLN
LENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALSLLFAIHSYRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCDGARSSQESDGGCGFQSIVISLKDSFYDKAEALVGVYRDS
DKSCSRTLTFDLTKYRE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccatcctcgtccctggcaagatccaccgcctggagctcgagaatttcaaatcc
tacaacggaaggcagaccatcggccccttctccgacttcaccgccatcatcggccccaac
ggctccggcaagtccaacctcatggacgctatcagcttcgtgcttggtgtccgctctgcc
cacctccgtggatcccagctcaaggatctcatatatgctttcgatgacagcgataaggag
aagagggggaggagcgccttcgtccgtctcgtctatctcatggcgaacggggcagaactc
cagttcactcgggccatcactagcgctggcagcagcgagtaccggatcgatggacgcgcc
gtgggatgggatgagtataatgcgaagctcaaatcgattggcatccttgtgaaggcacga
aacttcctcgtctttcagggtgatgttgagtcaattgcctcaaagaatcctaaagaactt
actgctctgcttgaacaaatttctggatctgatgagcttaagaaagattatgaggatttg
gaggagcagaaagctcaggctgaagaaaaatcagcacttgtttatcaggaaaagagaaca
atcgtgatggagcgaaagcaaaagaaagcacaaaaggaagaggcagagaaacatatgctt
ctacaagaagagctgaaatctttgaagatagaacatttcctatggcaacttttcaatatt
gaaaatgagatggaaaaaatctctgatgaacttgataaagaaaagaaaaagttggaggaa
gttctctcattacagaaggagtgtgactctgaggcagacatgaaaaagaaagaacaagct
ggctatctcaaagagctgtccatacgggaaaagaaaattgcaaagttgaaacttgagctt
gataagaagcaaccagaacttctgaaattgaaggaggaaaaatctcgcattaattcaaag
attaaaagcatcttaaaagagttggagaaaaagaaaaaagatcaaaggaagcatgcagag
gaaatagttaagctgcagaaggatctgcaagatatcactgaagctattcatgagctcaat
gagcagggtaagcagggttttggaaaacttcaactagcagatgatgaactaagtgaatat
cacagaataaaggaagaggcgggaatgaagactgctaaattaagagatgaaaaagatgtt
caagataggcaattacatgcaaacatagaggtggaacagaatttggaagaaaatcttcag
cagttgcttaatcgagaaagagagctgtcctctcaagaggatgattcccataaaagatta
aagcaattatctgattcagttacagggtataagaaggagcttgaaaagcttaagaaggaa
ctgagtaagattacaaaagatcgccagagttcagggtcgaaatatcagagtctaaaacag
aaacttgatgaagtagatcttcaattacgtgagctaaaagctgataagcatgaaagtgag
cgagatgctcggctctctgaaactgttcagagtctcaaaaggcttttttctggggttcat
ggtcgtatgactgaactttgccgtccctcacagaagaaatataacctggctgtcacggtt
gctatgggaaaatttatggatgctgtggtggttgaagatgagaatacaggaaaagagtgt
atcaagtatttgaaggagcaacgactccctccccagacattcatccctttgcagtcaatc
cgtgtgaagccaataactgagaaattgcgtaatctaggcggaactgcacagttggtcttt
gatgtgatacaatttgatcgatccttggagaaagccatcttgtatgctgttgggaatact
cttgtatgtgataagcttgatgaagctaaagctttaagctggacaggagagaggtataag
gttgtcaccactgatggaattctcctcacaaaatctggtacaatgactggcgggttaagt
ggtggaatggaagccaagtcaaataagtgggatgatagcacgatcgaagctcttaaaaaa
cggaaggatcagctggaatcagaaatggagagtcttgggtccttgagagcattacaaata
aaagaatctgaaacatctgaaaagatcacagggcttgaaaagaaaattcattatgccaaa
atcgaggaggcaaatattcatgaaaagctttcgaaactaactgatgaaaagcacaatatc
agagaggagattgatcgcctaaaacctgagcttcagaagttgaaaactgctattgctaga
agatctgaagagatccaaaaacttgagaaaaggatcaatacaattgttgatcgaatttac
aaggatttcagtgaatctgttggagtgaagaacattcgcgaatatgaagaggaacaactt
aaagcttctcaagaaatgtatgagagaaagcttagcttaagcaatcaaatgtcaaagttg
aagtaccaactagagtatgaacaaaagcgggatatgaaggccccaattgcaaagttggaa
tcctcaattgattctttaaaggaagacttgaaagatgtaaaacagaaagaatctaatgcg
gagaaagcagcagcagaaattacagaccagatgaaaataatagaagaaaaagctgatgag
tggaaggtcaagtcagatgcgtgtgaagatgctattgacgaactaaaaaaaaagagtgac
agtttcaaaggaactattgggaagctggagcgagttataaattctaaggaggcacgactt
gaacagcttagatctagtaagcaagaggtgcttgataagtgcgagcttgagcagttgaaa
ctccccatggccaatgatggaatggaaattgaatcttctggcacacaacctgtcttcgac
tatactcagctgagaagaacatatttgcaggagatgagagcttctgagagagataaactt
gagttagatttcaagcaaaggatggacaatttgatggttgaaattgaacgaaccgctcct
aacttaaaagcacttgatcagtatgaagcactacaagagaaagaaaaggaagtaattgat
aaatttgaagcaactaggaaagaagagaaggaaatatctgaacgatataactctgttaga
caaaaaaggtatgaacatttcatggaggcctttgatcatatatctaaaagtatagacaaa
atttacaagcaattgacgaagagtcaaacacatcctctcggggggacagcttatttgaac
ctagaaaatgaagatgaacctttcttacatggaatcaaatatacagccatgccccctacc
aaacggttcagagatatggagcagttatcaggtggtgagaaaacggttgcagccctttcc
ttgctctttgcaattcacagttacaggccatctccattctttatacttgatgaagttgat
gcagctttagataacctgaatgttgccaaggttgctgggttcattaggtccaaatcatgt
gatggtgctcggagcagccaagaaagtgatggaggatgtggtttccagagtatcgtgatt
tcactcaaggacagtttctatgacaaagctgaggcattggttggagtttatagagactct
gataaaagctgttcaagaactttaacatttgacctaaccaagtacagggagtaa
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