Zingiber officinale (ginger): 121997291
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Entry
121997291 CDS
T08725
Name
(RefSeq) probable protein transport Sec1b
KO
K15292
syntaxin-binding protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121997291
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121997291
Membrane trafficking [BR:
zof04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121997291
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121997291
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121997291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
TPR_26
Motif
Other DBs
NCBI-GeneID:
121997291
NCBI-ProteinID:
XP_042407570
LinkDB
All DBs
Position
6A:complement(107114236..107128596)
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AA seq
653 aa
AA seq
DB search
MSMSEWDFAHANADHKFFRQISRERILNEMLRSSETKSSTTPWKILIMDKFTLKVMSFSC
KMADITNQEISLVEDIFKRREPLPSMDAIYFIQPLKENVIMLLSDMSGRCPLYRKAYVFF
SSPIPKELIAYIKNDTSLLPRIGALSEMNLEYFAIDNQAFTTDHEMAFEELFGETAQNSR
KFNECLTTMATRVATAIASLKELPYVRYQVSKSMDESDTKNMRDLVPSKLATAVWDILSK
YKSSVPDFPQKETCELLIVDRTIDQIAPYIHEWTYDAMCHDLLEMDGNKYIYEAPAKPGA
TAEKKEALLEDNDPIWLELRYAHIADASERLHEKMSTFKSKNKAAQHQTSRDGGEISTKD
LQKIVQALPQYNEQVEKLSLHVEIAGKINRLIREMHLRDIGQLEQDLVFGDAGAKEVITL
LRTKQDASPESKLRLLMIYAATYPEKFEGDNGIKLMQLAKLSPEDMKAVNNLMYFGKIDP
KKKSDGNFSLKFDVQKKKQAARKEKSGEEETWALSRFYPVVEELIEKLNKGELPKDDFPY
INEPVAATQATASNGTQPVQSRRSRRTATWAKGRCSDDGYSSDSVLRNASVDFKNMGQRI
FIFMIGGATRSELRAVHKLTTKLRREIILGCTSLDDPPMFITRLKMLKGPDLP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcggaatgggacttcgctcacgccaacgcggatcataagtttttccgtcaa
attagtcgtgaaagaattttaaatgaaatgcttagatcgtcggaaacaaagagctcgact
accccatggaagatacttatcatggacaaattcactctcaaagtgatgtctttttcttgt
aagatggcagacattacaaaccaagaaatctcattggtagaggacattttcaaaagaagg
gagcctttaccttcaatggatgctatatatttcatccaaccactaaaagaaaatgtcatc
atgctactatctgacatgtctggaagatgtcctttgtacagaaaggcgtatgttttcttt
agttcacctatacccaaggaattgattgcttacattaagaatgacacgagtcttttaccc
cgtataggtgctcttagtgagatgaacttggagtattttgctattgataatcaggcgttc
accactgaccatgagatggcttttgaagaattatttggagaaacagctcaaaattctcgt
aagttcaatgagtgcttgactacgatggctacacgagttgccacagcaattgcttctttg
aaggaacttccttatgtgcggtaccaagtttctaagtccatggatgagtctgacacaaag
aatatgcgtgacttagtaccctcaaagcttgctacagctgtttgggatatcctgtcaaag
tataaatcttcagtccctgattttccccaaaaggagacatgtgagttactcattgtggat
cggacaatagaccagattgcaccttatatacatgaatggacatatgatgcaatgtgtcat
gatttgctcgagatggatggaaacaaatatatatatgaggcaccagcaaagcctggtgca
acagctgaaaagaaagaagcccttttggaagataatgaccccatatggcttgaactgcgc
tatgcacatatagctgatgctagtgaaaggttgcatgagaagatgtctacatttaagtca
aagaataaggctgcacaacaccaaacttccagagatggcggtgagatttcaactaaagat
ctgcaaaaaatagtccaagctttaccacaatacaacgagcaagttgaaaagctttctctt
catgttgagattgcaggaaaaatcaataggttgattcgagaaatgcatcttagagacata
ggacagttagaacaagatcttgtctttggagatgcaggggcaaaggaagtgattactcta
ctgaggacaaagcaggatgccagtcctgaaagtaaattaagattattgatgatttatgca
gccacttaccctgagaagtttgaaggggacaatgggatcaagttgatgcagctggcaaaa
ttatcaccagaggatatgaaagctgtaaataacttgatgtacttcggaaaaatagatccc
aaaaagaaatctgatggaaacttctctcttaaatttgatgttcagaagaagaaacaagct
gcaagaaaggaaaagagtggtgaagaggaaacctgggcattgtcacgtttttatccagtg
gtggaggagctaatcgagaaactaaacaaaggtgagctacccaaggatgactttccatat
ataaatgaaccagttgctgctactcaagccacagcatcaaatggtacacagcctgtccaa
tccaggagatccagaaggactgccacatgggcaaaaggtcggtgctctgatgatggctat
tcaagtgattctgtacttcggaatgcatctgttgatttcaagaacatgggccagcgtatc
tttatattcatgatcggtggagcaactcgatctgagttacgtgcagttcacaaacttaca
acaaagttgagaagagaaatcattcttggatgtactagtctcgacgatcctcccatgttc
atcacaagactcaagatgcttaaaggaccggatcttccgtaa
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