Zingiber officinale (ginger): 121997299
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Entry
121997299 CDS
T08725
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121997299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121997299
03032 DNA replication proteins [BR:
zof03032
]
121997299
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
Sm proteins
121997299
U2 snRNP components
121997299
Complex B
U1 snRNP components
121997299
U4/U6.U5 tri-snRNP components
121997299
Complex C
U2 snRNP components
121997299
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121997299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
EBNA2_Core
YomU_Tube
Gemin7
THSD1_N
Motif
Other DBs
NCBI-GeneID:
121997299
NCBI-ProteinID:
XP_042407581
LinkDB
All DBs
Position
6A:complement(107250804..107261202)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLSNETVSIELKNGTIVHGTVTGVDISMNTHLKTVKLTFKGKNPVSLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRSLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagctgagcaacgaaactgtctcgatcgagctcaag
aacgggaccattgtccatggcaccgtcaccggtgtggatatcagcatgaacacacacttg
aagactgtgaaactaacattcaaggggaaaaatcctgtttcccttgatcacctcagtgtg
agaggcaataacattcggtactatatcctacctgacagcctgaaccttgagactttactt
gtcgaggaaacacctcgggtgaagccgaaaaagcctactgctgggagatcactgggccgt
ggtcgtggccgggggcgcggtcgtggacgaggccgtggtcgttag
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integrated database retrieval system
