Zingiber officinale (ginger): 121997419
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Entry
121997419 CDS
T08725
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zof03029
]
121997419
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121997419
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121997419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DnaB_C
Toprim_4
Toprim_2
AAA_25
Toprim
AAA_29
La_HTH_kDCL
Motif
Other DBs
NCBI-GeneID:
121997419
NCBI-ProteinID:
XP_042407748
LinkDB
All DBs
Position
6A:110574817..110607447
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AA seq
678 aa
AA seq
DB search
MLFTVPRRSIRGLLMGGVKYPSALNSVCSPPPFLRHRFLHLRTSIRCPSEVNSLFCCLKS
SRFFSYVACPSTGPHAVEGDEVAKRVDYLTSKLEAFGIHSRGCKPGQHVRRLCPKCEGGS
SAERSLSFLIRKDGDSAMWQCFRAKCGWKGYIPVYGDANTTYGSKNKNFRVITKRDLQLE
PLCEELISYFSERNISEETLRRNSVMQSKDDNEIIITFCYKRKGVLVSCSYRTVSKNIWQ
ELGTESIFYGLDDINQATDVIIVLSEIDKLSMEEAGYLNCISVPCGVVEQICNGQLDLED
TKFQYLWNCNEYLEKASRIILATDSDSSGQAVAEVLARRLGKERCWRVKWPKKNDAELCK
DANEVLMYLGPDSLRKVVENAELYPIKGLFKFRDFVHEIDEYYYQSNREHLGVSTGWRAL
DGLYNVVAGELTLITGVPNSGKSEWIDALLCNINERHGWKFALCSMENKVEEHARKLLEK
HIKKPFFSARMTVEEFEAGKKWLDDTFYLIRCEDDCLPSVTWVLDCAKLAVLRYGVRGLV
IDPYNELDHQRSNFQTETEYVSQMLTKVKCFAEQHSCHVWFVAHPKQLHNWDGRAPNLYD
ISGSAHFVNKCDNGIVIHRDRNLTTGLGVEVYVRKVRNKVSGTVGVATLSYNRATGEFHD
KDQNCSGTAVMQPLQIPS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctctttacagtccctcgccgctctatccgtggcctcctcatgggtggcgtcaagtac
ccctctgctctaaactcggtctgctcaccaccgccgttcctccgccaccgctttctccat
ctccgcacctcaatcagatgtccttccgaagtcaatagcctcttctgttgtttgaagtct
tcccgattcttctcctacgttgcttgccctagcacgggtccacatgccgttgaaggcgat
gaggttgctaagcgggtagattatttgacatcgaagctggaggcatttgggattcatagt
cgtggatgtaagcccgggcagcatgttcgtcgattatgcccaaagtgtgaaggagggagt
tctgcggagaggagcctttcatttctaatccgcaaagatggagattcagccatgtggcaa
tgttttagagctaaatgtggttggaaaggttatataccggtttatggagatgccaataca
acttatggttcaaaaaataagaattttagagtaatcactaaaagggatcttcagctagag
ccattatgtgaagagctcatttcatatttctcagaaagaaatatctcagaagaaactctt
cgaagaaattctgtcatgcaaagtaaagatgataacgagattattattaccttttgttac
aaaaggaaaggagtgcttgtaagctgcagttatcgtactgtctccaagaatatttggcag
gaattgggcacagagagcatcttttatggacttgatgacataaatcaagctacagatgtt
ataattgttctaagtgaaatagataagctctctatggaggaggctggctacctcaattgt
attagtgtaccttgtggtgtagtagaacaaatttgcaacggtcaacttgatctggaggat
acaaagttccaatatttgtggaactgcaatgagtatctagaaaaggcatctcggataata
ctagcaacagattctgactcctcgggccaagctgtagctgaagtactagcacgacgcctt
ggtaaagaaaggtgctggagagttaagtggccaaagaaaaatgatgctgaactttgcaaa
gatgctaatgaggttctaatgtatcttggacccgattctttgaggaaggttgtagaaaat
gctgaattgtatcctataaagggtctgtttaagttcagagattttgttcatgagattgat
gaatactattaccagagtaatagagaacacctcggtgtctctactggttggagagctttg
gacggattatacaatgttgtggctggagagctgaccttaataacaggcgttccaaattca
ggcaaaagtgagtggatagatgccttgttatgtaatatcaatgaaaggcatggatggaag
tttgcactctgttcaatggaaaacaaggttgaagaacatgcacggaaacttttggaaaag
cacattaagaaacccttcttcagtgcaagaatgactgttgaggaatttgaagcgggaaaa
aaatggctcgatgatacattttatctaattcggtgcgaggatgattgccttccatctgta
acttgggttcttgactgtgctaaacttgcagttcttcgttatggtgttcgtggtcttgtt
attgacccatataatgaacttgatcatcaacgttccaactttcaaacagaaacagagtat
gtgagccaaatgcttaccaaggtcaagtgctttgctgagcagcactcttgtcatgtgtgg
tttgttgcccatccaaaacagctacacaattgggatggtagggcacctaacctatatgat
attagtggaagtgcacattttgtaaataaatgtgataatggaattgtcattcatcgcgat
cggaatttgactactggacttggtgttgaggtatatgtgcgtaaggtacgaaataaggtt
tctggtacagttggagtagcaacgctatcttataatcgcgccacaggagagtttcatgat
aaagatcagaattgttctgggactgctgtgatgcagccccttcaaattccatcttga
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