Zingiber officinale (ginger): 121997553
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Entry
121997553 CDS
T08725
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121997553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121997553
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121997553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Hydrolase_6
DUF1707
Motif
Other DBs
NCBI-GeneID:
121997553
NCBI-ProteinID:
XP_042407958
LinkDB
All DBs
Position
6A:114469213..114538495
Genome browser
AA seq
1899 aa
AA seq
DB search
MPLFLSEEEFRLISDDATAVAQSADAAIRDLHRQLDTLKAESDASSIAAEQNCALFEQRY
ETLSSDLAQVRAENAQLSASLEKRFSEIADAQAEKHQLHLKAIAKDGETERLSLEVGEVN
KSKRHLLELLEQKDAEVREKNTTLQSYLDKIINLTESAAEKEARLLDLEAECARTRFTCN
CVNQEKELLEKHNTWLNEEFSMKVNCLIEERKAHMEVVADLSAKLSESERQINDYSSSLK
HSTERVDELEVKNASLEKELCSSKDSAATNEVQLTSELSTVRKLAELYKERSEEWSKKSG
ELEGVIKALETHLCQVENEYKDKLEKESSQRKNLEKDAADMKGKIEKYEAELENARKSSE
ISLVPVANFHLDSSLNDLTVAETTNIENNQILVPKIPLGVSGTALAASLLRDGWSLAKMY
EKYQEAADALRHEKWGRKNAEAVLARVLHEIEEKAELILDERDEHARMIEAYNLMNKKLL
QSLEKHENFENTILHLKAESRKWECEYTIAQKEITDLEKQVTLLLKECQEIQVRCGVTQL
CNNNPLASAVNIDEGRSTSEHLISFKDINELVEQNVQLRGHVARLSTEMENKETELMDAF
QIQLQKITAEAASKVEAMLKRSEEQGQMIESLHSSVAMYRRLYEEEQKISASTHPNTGDL
AEDRKNELMLMFEGSQDVSKKAYDRLAERSKGHEEDLAKFRGEATLLRSERDKKVLEANF
AKDQVDGLKKEIEHQRKEANAVSARNVELTQLVVDFQKRLRESSNSVQEAEEIIRKLSME
VSILKHEKEILTNSERRATDEIHNLSERLHRLQSTLDTIQSADEVRESSRTVEIKKLEEY
AKRVEREWAEANRELQEERNRVRVLTNDKDNALETSIKQLQEMKKELADAWATVTSAESR
AAIAEARCSEIETRVMSGEQKDGKGDARYDHPMFSTNEDSGELWRVREELERLREESQAN
KDYMVQYKEIAHTNEMALKQIESAHEAYKLEAEKVKRALADDVSALRNKVSEMEKKYILK
CEEVASLIEAKDREISALFAETSSLRVEISQKLAQIESLETQVSSLKEDLDGEHKQWQIS
QRNYERQVMLQSETIQELTKTSHELSSLQCEVVKLREVSDMLKNEKEILKSSWENEKTTL
HAMKDESDKKYNEVNEQNKILHSQLESLYARFGEKGHNSAGIVPQTVDSKAESDLHSVIS
YLRRSKEIAETEIILLKQEKLRHQTQLETALKASETAKELLQSKRENDRALLLKDEELKA
LLIQVREINLLRESNVQLREENKHNFEEFQRYLNEAQKARVDAEKFENLLREKQLQYDAS
QKEVDVLRTQIDHLNIRISELAECYKNIDLVEYEKMKDEREKLKVFLRKSETEIELTKKL
LSEKQETIANLDQSLAKCQLDLAEQEKRVNNAVQAQGTIKLENEKQKKIMSVLKKRNDNL
MKEKEELNQEKMVLLKEIDDFKSGQKTSVETSIKQATKEKDTRIQILERTLERERDENKK
QKQKRESTEKTIFELIQKISKEKKALSEEFLRHKLAAEALKSSGGTTSQLPSETTLSEQF
DRYIQATVQLETAPGSIADVGPATATDTVSVDASIATAGRRVATQPTRPLIPQVKPAVEK
EKDSAVVQPTSSARRIVGRRIVRPRLARPPEEPQADGGTSGVEGSSLTEDEKTSTSHEHE
SSGDNLFGHPASSGCKNIASTSNENEDVAPRDLGADAGALLKEMDSDEMYGPTSSAQVAP
TDCKHPALKTLQKDLVDATRDELGADVVPPLKKSKYTDGLQDLTQDISNEQAVLPSAVDV
ETTEASFPSVLHPTSEEIEVDQVMEEILDSIAEESFASDQQNPSLDESAVTEDFPDKPKE
TCELLDESLRSKAANEITEIPAAEDDREEGELPDEMVHG
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcctctcggaggaggagttccgactcatctcagatgacgccactgctgtc
gcacagagcgctgacgccgccatccgcgacctccaccgccagctagacaccttgaaggca
gagtccgatgcctcttccattgcagccgagcagaactgcgccctctttgagcaacgctat
gagaccctttcgtccgacttggcgcaggttcgagccgagaacgctcagctatctgcatcc
ctcgagaagagattttcagagattgcggatgcgcaagctgagaagcaccagctccatctc
aaggctattgcaaaggacggagagactgaaaggctatcattagaagtaggtgaagtcaac
aagtctaaacggcatttgctggaattgctggaacagaaggatgcagaggtcagagagaaa
aacaccacacttcagagctatttagacaagattattaatctcaccgaaagtgctgctgaa
aaggaggcaagactgttagatctagaagcggaatgtgcacgcactcgttttacttgtaat
tgtgtcaatcaggagaaggaacttcttgaaaagcacaacacatggcttaatgaggaattt
tccatgaaagttaactgtctaattgaagaacgaaaggcacatatggaagttgtagcagat
ttatccgccaaactttctgagtctgagaggcagattaatgactattctagttcacttaaa
cacagtactgaaagggtggatgagttggaggttaaaaatgcttccttggaaaaggaactt
tgttcatccaaggattctgcggcaaccaatgaagtgcaactcacatctgaactctcaact
gtaagaaaacttgctgagctttataaagaaagatctgaggaatggtccaaaaagtctggg
gagcttgaaggtgttatcaaagccttagagacacatctttgtcaagttgaaaatgaatac
aaagataaacttgaaaaggaatcatcacaacggaaaaatcttgagaaggatgctgcagac
atgaaagggaaaatagagaaatatgaagctgaacttgagaacgcaagaaaatctagtgaa
ataagtcttgttccggtggccaattttcatttggattcaagtttaaatgatctaacagtt
gcagaaaccaccaacattgagaataatcagattcttgtccctaagataccacttggtgtt
tctggcacagcattagcggcttcccttctacgtgatggctggagtcttgctaagatgtat
gagaaataccaagaagctgctgatgctttgcggcatgagaagtggggtcggaaaaatgca
gaagctgttttggcacgggttctgcatgaaatagaagaaaaagctgaactaattcttgat
gaacgagatgaacatgcaaggatgatagaggcctataatttgatgaacaaaaaattgctg
cagtcattggagaagcatgaaaattttgagaatacaattctgcatttgaaggctgagtcg
agaaagtgggagtgtgaatatacaattgcccagaaggaaattactgatctagagaagcag
gtaacactactcttgaaggaatgccaggaaattcaagttcgctgtggtgttacccagtta
tgcaataacaatcctcttgcaagtgcagttaatattgatgaaggaaggtcaacttctgaa
catcttatttcttttaaggacataaatgaactagtagagcaaaatgttcaacttcgaggt
catgttgcccgactttccactgaaatggaaaataaggaaacagaattaatggatgctttc
caaattcaactccaaaagatcactgctgaggcagcaagcaaggttgaagcaatgcttaaa
aggtctgaagaacaagggcagatgattgaatctcttcacagttctgttgctatgtataga
aggctgtatgaagaagagcagaagatatcagcatctactcatccaaacactggtgatctt
gcagaagatagaaagaatgagctaatgcttatgtttgagggttctcaggatgtttcaaaa
aaggcctatgatcgacttgctgaacgctctaaaggtcacgaggaggatttggcaaaattt
aggggtgaagccacactattaagatcagaacgtgataaaaaggttctggaagctaacttt
gctaaagatcaagtggatgggctaaagaaggaaattgaacaccagaggaaggaagctaat
gctgtctcagctagaaatgtggaacttactcagttggtagttgattttcagaagaggctc
cgagaatcttctaattctgtacaagaagctgaggagattataagaaagctatccatggag
gtgtctattctgaagcatgaaaaggagattttgactaattcagagaggagagccactgat
gaaattcacaacttatctgagagactacatcgtcttcagtcaaccttggacaccattcaa
agtgcagatgaggttcgggagagttcaagaacagttgaaattaaaaaacttgaggaatac
gcaaaacgggtagagagagaatgggcagaagctaacagagagctacaagaagaacgaaat
cgtgttcgtgttttaacaaatgataaggataatgcacttgagacttctataaaacaactt
caggaaatgaagaaagaattagctgatgcttgggctactgttacttctgctgaatctagg
gctgcaatagctgaggcccgatgttctgagattgaaacaagggtaatgagtggtgaacaa
aaggatggcaagggcgatgccagatatgaccatccaatgttttctaccaatgaggattct
ggagaattgtggagggtgagagaggaattggaaagactaagagaggagtcacaggccaac
aaggattatatggttcagtacaaagaaatagctcatacaaatgagatggcattgaagcaa
attgaatctgcccatgaggcatacaaattagaggcagaaaaagtgaaaagggcattagct
gatgatgtctctgccctcagaaataaggtatctgagatggagaaaaaatacatattgaag
tgtgaagaagttgcttcacttattgaggccaaagatagggaaatctctgctctttttgct
gaaacttcaagtctaagggtggaaatttctcagaaattggctcaaatagaatcgttggaa
acacaagtatcttccttgaaagaagacctagatggggaacacaagcaatggcaaatttcc
caacgcaactatgagagacaggttatgcttcaatctgagacaatacaggagctcactaaa
acatctcatgagttgtcttctctgcaatgtgaagttgtaaaacttagggaggtttcagat
atgctgaaaaatgaaaaggagatcctaaagtcatcttgggaaaatgaaaagacaacattg
catgctatgaaggatgagtctgacaagaagtacaatgaagtgaatgaacaaaacaaaata
ttacacagtcagctggagtctctatatgccagatttggtgaaaagggacataattctgct
ggaattgtcccccaaactgtagattcaaaagcagagagtgatttgcatagtgttatcagc
tatcttcgccgatcaaaagaaatagcagagactgagataatcctgttaaagcaggaaaag
ttacgccatcaaactcaacttgaaactgcacttaaggcttctgagacagctaaagagttg
cttcaatctaaacgtgagaatgatagagcactattgttaaaagatgaagaattgaaggct
ctgctgattcaggtaagagaaataaatttgcttcgtgaaagcaacgtgcagcttcgtgaa
gagaataagcacaacttcgaggaattccagagatatctcaatgaagcacaaaaagctaga
gtagatgctgaaaagtttgaaaatcttttaagggagaaacaattgcagtacgatgcttcc
cagaaagaggttgatgtgttgaggacacagatagaccatttaaatattagaatttctgag
ttagctgaatgttataagaatattgatcttgtggagtatgaaaagatgaaagatgaacga
gagaagctgaaggtgtttttgaggaaatctgagacggagattgaactgacaaagaagctt
ctgtcagagaaacaagaaaccatagccaacttggaccaaagtcttgctaaatgtcaactt
gatttagctgaacaggagaagagagttaataatgctgttcaagcccaaggaactatcaag
ctagaaaatgaaaaacaaaagaaaattatgtctgttctgaagaagagaaacgataattta
atgaaggagaaggaggaactgaaccaggaaaaaatggttcttctgaaagagatagatgac
tttaaatcaggtcaaaaaacctcagttgagacatcaattaaacaggctactaaggaaaag
gacactagaatacagatcttagagagaacattggaaagagagagggacgagaacaagaag
cagaaacaaaaacgggaaagcacagagaagacaatttttgaacttattcagaaaatcagt
aaggaaaagaaagcattatctgaggaatttttaaggcacaaacttgctgccgaggcattg
aagtctagcggaggaactacttctcaacttccgtcagagaccacattgagcgaacagttt
gatcgatacattcaagctaccgttcagcttgaaactgccccaggttccattgctgatgtg
gggcctgccacagcaactgatacagtgtccgtggatgcatcaattgcgactgcaggacga
cgagttgctactcagccaaccaggcccttgattcctcaagttaaacctgctgtggaaaag
gagaaagattctgctgtggtccaaccgacttctagtgctcgaaggatagtaggaagaagg
atagttcgtcctcgtcttgcgcggccgcccgaagagcctcaagctgatggcggaacatct
ggggtggagggttcttcactaacagaagacgagaaaactagtacatcccacgagcatgaa
tcttctggtgacaatttgtttgggcaccctgcatcttctggctgcaaaaatattgcctcg
acatccaatgagaatgaagatgttgctcctagagatctcggtgctgatgctggagctctg
ctaaaggaaatggactctgatgaaatgtacggtcccacttcatcagcacaagttgcacct
actgattgtaaacatccagccttaaaaacattgcaaaaagatcttgtcgatgctacaaga
gatgaacttggtgccgatgtggtgccacctttaaagaaatcgaaatatacagatgggttg
caagacctgacccaagatataagcaatgaacaagccgtcttgccctcagcagtagatgtt
gaaacaactgaagcttcctttccatctgtattgcatccaacctctgaggagattgaggtg
gatcaggtaatggaagagattttggatagcatagcagaggaatcttttgccagcgaccag
caaaatccatctctagatgaatcagctgttactgaggactttccggacaagcctaaagaa
acatgtgaattgttggatgaaagcctaagaagcaaggcggcgaatgagatcacagaaatt
cctgccgctgaagatgatagggaagagggagagctaccagatgaaatggtacatggatga
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integrated database retrieval system
