Zingiber officinale (ginger): 121997593
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Entry
121997593 CDS
T08725
Name
(RefSeq) RNA-binding protein 208-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121997593
03041 Spliceosome [BR:
zof03041
]
121997593
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121997593
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121997593
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
121997593
NCBI-ProteinID:
XP_042408021
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All DBs
Position
6A:115585691..115594886
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AA seq
435 aa
AA seq
DB search
MNQRLKLQQQQALMQQVMLQQQQQQQIYHSGVLAAAMSQIEPVPSGNLPPGFDPSTCRSV
YVGNIHQNVTESLLAEVFQSVGPLEGCKLIRKEKSSFGFVDYHDRRSAALAIMSLHGRQI
YGQAIKVNWAYASGQREDTSGHYHIFVGDLSPEVTDATLFACFSVYPNCSDARVMWDNKT
GRSRGFGFVSFRNQQDAQNAINDMTGKWLGSRQIRCNWATKTTGEDKPQSEDHNAVFLTE
GSSNPGTDGAQESTNEMIPENNPAYTTVYVGNLAHEVTQTELHLQFHILGAGVIEEVRIQ
RDKGFGFVRYGSHDEAALAIQMANGRIVCGKSMKIQLLLQCSWGTKPTPPGTASNPLPLP
IPPFQLVPMPDLQGFTATELLAYQRQLALSQAAAGAMVGQHGLAAAQAPAGIGGSQVIYE
GYPNLSSAQQLLYYD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaggttgaagctgcagcagcagcaggccctgatgcagcaggtcatgctccag
cagcagcagcagcagcagatttaccattccggggtcttggctgccgccatgtcgcagata
gaacctgttccaagtggcaatcttccgcctggttttgatccatccacatgccgcagtgta
tatgtgggcaatatccatcaaaatgtgacagagagcctgcttgcagaagtttttcaaagt
gttggtccacttgaaggatgcaaactaatcagaaaagaaaagtcttcttttgggtttgtt
gattaccatgatcgaagatctgcagctcttgcaatcatgtcattgcacggacgacagata
tatggccaggcaatcaaggtgaattgggcatatgccagtggtcaaagggaagacacttct
ggacattaccatatttttgttggtgacttaagtcctgaggtcactgatgcaacacttttt
gcatgcttctcagtgtaccctaattgttctgatgcacgggttatgtgggataataaaact
gggcgctctagaggatttggctttgtttcttttcgcaaccaacaggatgctcaaaatgct
attaacgacatgactggcaaatggcttggaagccgacaaataaggtgcaattgggcaacc
aagactactggagaagacaaaccacaaagtgaggatcataatgcagtttttttgaccgaa
ggaagtagcaaccctggaacagatggtgcccaagagagtacaaatgaaatgatccctgag
aacaaccctgcatacacaacagtgtatgtcggtaatctggcccatgaggtaacacaaact
gagcttcatctccaattccatattctaggggctggtgtgatcgaggaagtgaggatacaa
agggataaaggatttggattcgtgagatatggtagccatgacgaagctgctttagccatt
caaatggctaatggaaggatagtttgtggaaaatcaatgaaaatccaattactcttgcag
tgttcttggggcaccaagccaactccaccaggaacagcttctaatccactaccgcttccc
attcccccatttcagcttgttccgatgccagatctccaaggttttacagctactgagctc
ctggcgtatcagcgtcaactggctttaagccaggcggctgctggagcaatggttggccaa
catggacttgctgctgcacaggctccagcagggattggtggttctcaggtgatctatgaa
ggttaccccaatctttcatctgctcaacagcttctgtactacgactaa
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