Zingiber officinale (ginger): 121997631
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Entry
121997631 CDS
T08725
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121997631
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121997631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
121997631
NCBI-ProteinID:
XP_042408076
LinkDB
All DBs
Position
6A:116633732..116684680
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AA seq
1605 aa
AA seq
DB search
MEVNQRPARAIQLHPSRAAVVDLFNLYLGRSTRQRLDDASRETPTKLQKRIIAPHGELPR
RDEQFILDFEQLQGQFSDLEQLRTTTEAVLISFIVQCSSHAPQSEFLLFAIRSLCSRGYL
KWDTFLLSLLSAVSSAEATFGQVAPTTPVGLSSPLIISSSSMPNASNLHVSSSSNITMSN
ASNIHASNPASPLPTMHVVSSPAQSTTDQSAGTTLSPIKPSELSVSGHHGMTRSSHIVKG
NAIGSLRQFSCRIILAGLDFSLKPITHAEVFTHMLNWLVNWDQRSVVSEESDNKKTWKPE
RPLHEWRHTCLDVVWVLVDEDKCRIPFYELIRSSLQFMDNIPDDEAMFSIILEIHRRRDM
VAMHMQMLDQHLHCPTFATHRFLTQSYPSLTGESLANVRYSPITYPGVLGEPLHGEDLAA
SIPKGSLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYKPPQTSTPGAVFSPEMICEAV
VDRTIELLKITNSETQCWQEWLIFADIFFFLMKNGCIDFLDFINKLTSRITRGDQQILRS
NHVTWLLAQIIRIELVMNTLSSDPKKLVETTKKIISFHKEDKNIDPSNVSPQAILLDFIS
SSQTVRIWSFNTSIREYINNDQLQKGKQIDEWWRQVTKGERTLDFMSLDDRSMGMFWVLS
FTMDQQTCEAVMNWLSSAGVTEILQGPNMQPNDRMMMMRETYPLSMTLLSGLSINLCSKL
AFQLEEAIFLGQAIPSIAMVETYVRLLLIAPHSLFRPHFTNLTQRSSSFLNKPGMSILLL
EILNYRLLPLYRYYGKSKALMNDVTKIISTIKGKRGEHRHFRLAENLCMNLILSIRDFFV
VKKELKGPTDFTETINRITIISLAITIKTRGVAEVEHMLYLQPLLEQIMATSQHTWSQKT
MRYFPTLIRDFLIGRIDKRGQAIQAWQQAETTVLNQCTQLLSPSADPTYVMTYLNHSFPQ
HRQYLCAGAWMLMNGLPESINSTNLGRVLRELSPEEVTSNIYTMVDVLLHQIQIELQRGL
PAQDLLSKAISNFSFFIWSLELLPLDIIVLALIDRDDDPYALRIVISLLDKPELQQRIRM
YCTSRSPEHWAHNQLSKRVELQKALGNHLSWKDRYPTFFDDIAARLIPVIPLVVYRLIEN
DATDIADRVLNSYTQLMAFHPLRFSFVRDTLAYFYGHLPNKLILRILKVLDLTKIPFSES
FPQYMASPNSSVCPPQEYFANLLLGLVNNVIPSLNSKSKSDSSGDSSGNFGRATLNRTQA
TSISSSDGQKAFYENQDPGTYTQLVLETAAIEILSLPASASQVVASLVQIIVHIQPTLIQ
SGSGISHGQTSGLPTSPSAGSTESMNTSRSTSSTSWVNANSFVSKSGYSCQQLSCLMIQA
CGLLLAQLPPEFHLQLYSEAARIIKDCWWLVDGKRSLDELESAVGYALLDSTWASQDNTS
TAIGNIVSLLHAFFSNLPHEWLESTHTIIKHLRPVSSVAMVRIAFRIMSPLLPRLAFARP
LFMKTLALLFNVMADVFGKNSQPAVSAEASDIRDLIDFLHHAVMYEGQGGPVQNHSKPKV
EILTLCGKVMGLLRPDVQHLLSHLKIDQTSSIYAATHPKLTQNSA
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaccagcgccccgcgcgggctatccaactccacccttcccgcgccgccgta
gtcgatctcttcaacctctatctcggcaggagcacccggcagagattggacgacgcctct
cgcgagactccgaccaaacttcagaaaaggattattgctcctcatggggagcttccacgt
cgcgacgaacaatttatattggattttgagcaattacaaggacaattttcagatctggag
caactgcggacaaccactgaagcagttcttatatctttcattgtgcagtgcagcagtcat
gcaccacaatcagaatttctcctttttgcaataagaagcttgtgcagcagaggttatttg
aagtgggatacgttccttctttcactcctctcagcagtttcctctgctgaggcaacattt
gggcaggtggctcccacaactcctgttgggctatcatcacctttgattatttcatcatca
tctatgccaaatgcatcaaacctacatgtttcatcatcatctaatattactatgtcaaat
gcttcaaacatacacgcttctaatccagcatccccattgccaactatgcatgttgtcagt
tcaccagctcaatctactactgatcaatctgctggcacaactctatcaccaattaagcca
tcggaactttctgtctctgggcatcatggtatgactaggtccagtcatatagtaaagggc
aatgctattggttcgctccgtcagttctcatgcagaattattctagctggcctagatttt
agtctaaaaccaataacccatgcagaagtatttactcatatgcttaattggttggttaat
tgggatcaaaggtctgtagtttcagaggaaagtgataacaagaagacctggaagcctgaa
agacctttgcatgagtggaggcacacatgcctggatgttgtatgggtgttggttgatgaa
gataagtgccgtattcccttctatgagcttatccgtagcagcttgcagtttatggacaat
attcccgatgatgaggcaatgtttagcatcattctggaaatacatagaagaagggatatg
gttgcaatgcatatgcagatgttggaccagcaccttcattgccctacatttgctactcat
aggttcttgacacaatcctatccaagtttaacaggtgaatcattggcgaatgtccgttat
tctcccatcacttaccctggtgttttaggagaaccattgcatggagaggatcttgccgcc
tctattccaaaaggaagtttggattgggaaagagccttgcgttgtcttagacatgcgctt
cgtacaactccttcgcctgattggtggagacgtgtactccttgttgccccttgttataaa
cctccacagacatcaacacctggtgctgttttctcccctgaaatgatttgtgaggcagtt
gttgacagaacaatagaattattaaagatcacaaactcagaaacacaatgctggcaggaa
tggcttatatttgcagacattttcttctttctaatgaagaatggatgcattgattttctt
gatttcattaacaaactcacctctcgaatcacaagaggtgaccaacagattctgcgtagt
aatcatgtgacttggctgcttgcacagattattcgcattgagcttgtgatgaatacattg
agttcagacccaaagaagctggtggagactacaaaaaagatcatttcatttcataaagaa
gataaaaatattgatccaagtaatgtcagtcctcaagcaattctattggatttcattagt
agcagtcaaactgtacgtatttggtctttcaacacttcaattagggagtacatcaacaat
gatcagcttcagaaaggaaagcagatagatgaatggtggagacaagtaaccaaaggagaa
cgaacattggattttatgagtttagatgaccgatctatgggaatgttttgggttctctct
tttacaatggatcagcaaacgtgtgaagcagttatgaattggctttcatcagctggagta
acagaaatcctacaaggacctaatatgcaacctaatgataggatgatgatgatgcgagaa
acttaccctctatctatgacattactttccgggttgtcaatcaatttatgctcaaagctt
gcatttcaacttgaagaagccatatttctcggtcaggccatccctagcattgccatggtc
gaaacctatgtcagattgctgcttattgctcctcactccttatttcgccctcatttcacg
aatttgacccaacgatcatcatcttttttgaacaagcctggaatgtctatattgctcctt
gagatattaaactacagactacttcctctatacaggtactatggcaagagtaaggcattg
atgaatgatgttactaagataatctcaacaatcaagggaaagcgtggagaacatcgccat
tttagattggctgaaaatttgtgcatgaatttgattctctcaatacgagattttttcgtt
gtcaagaaagaattgaaggggccaactgattttacagagacaattaatcgaatcacaata
attagtttggctataaccattaagacacgtggagttgctgaggtggagcacatgctttac
cttcagcctttgttggagcagattatggctactagtcagcatacatggtcccagaaaact
atgcgatatttccctacacttattcgggattttttgattggaaggatagataagagggga
caagctatccaagcatggcaacaagcagagacaacagttcttaatcaatgtactcagctt
ctttctccctctgctgatcctacttatgttatgacataccttaatcatagctttcctcaa
catcgtcaatatctctgtgctggtgcttggatgcttatgaatggactgccagaaagcatc
aacagtaccaatcttggccgtgttttaagagaattgtcacctgaagaagtgacatctaat
atatatacaatggtggatgtcctccttcatcaaattcagatcgagctgcaacgcggtctt
cctgctcaggatctattatcaaaagcaatttcaaatttttccttttttatttggtcgctt
gagctacttccattggatattatagttcttgctcttattgatcgggatgatgacccttat
gctctgcgcattgtgataagtcttctcgacaagcctgaacttcaacaacggattagaatg
tactgcaccagtcgttctcctgaacattgggcccacaatcaactttcaaaaagagttgaa
ctgcaaaaagctcttggcaaccatctctcatggaaggatcggtaccccacattttttgat
gacattgccgcacggttaatccctgttattccgcttgtagtttatcggctcattgagaat
gatgctactgatattgctgatagagttcttaattcttatactcaacttatggcatttcac
cctttgaggttcagttttgttcgtgatacacttgcatatttttatggtcatcttccaaat
aaacttattctccgaatactaaaagtgctagatctcacaaagattccattttcagagtca
tttccgcaatatatggcttcgccaaattcttctgtatgtccgccacaagaatattttgct
aatcttttattgggtcttgtaaataatgtcataccctctctaaatagcaaatcaaaatcg
gactcttcaggagattcttctggcaattttggccgtgcaactttaaatagaacccaagca
acttcaattagcagttccgatgggcagaaggccttctatgagaatcaagatcctggaaca
tatacacaacttgtcctagaaactgcagctattgaaatcctctctcttccagcatcagct
tctcaggtagtggcttctcttgtacaaattattgtccacatacagccaacgcttatccag
tctggcagtggaatttcacatgggcaaacttctggtcttccaacttcaccttctgctgga
agtactgaatcaatgaacacaagtcgttcaacttcttcaacaagttgggtcaatgctaac
agttttgtttcaaaaagtggctattcttgtcagcagttatcttgtttaatgatccaagca
tgtggacttttgcttgcccagctaccgccagaatttcatctacaactgtattctgaagca
gcacgcatcataaaagattgttggtggcttgtggatggcaaaagatcactggatgagctg
gaatccgctgttggctatgctttgttagattccacatgggcttctcaggataacacatca
actgccataggaaacattgtgtctctactgcatgctttctttagcaatcttccacatgaa
tggctggaatcaacacacacaattattaagcatctacgcccagtgagttctgtggcaatg
gtccgaatagctttccgaataatgagccctttattgcctcgtcttgcctttgctaggcct
ctttttatgaagacattagcactgctgttcaatgtgatggctgatgtttttggaaagaac
tcacagcctgctgtttctgccgaagcatccgatattagggaccttattgacttcttgcac
catgctgtgatgtatgaaggacaaggtggacctgtacagaaccatagcaaacctaaagtg
gagatcctcacactgtgtggcaaagtcatgggacttttgagacctgatgttcaacacctc
ctttctcacttgaagattgatcagacttcctccatctatgcagcaacgcatcccaagcta
actcaaaattcagcttga
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integrated database retrieval system
