Zingiber officinale (ginger): 121997786
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Entry
121997786 CDS
T08725
Name
(RefSeq) far upstream element-binding protein 2-like
KO
K13210
far upstream element-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121997786
03041 Spliceosome [BR:
zof03041
]
121997786
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121997786
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121997786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
121997786
NCBI-ProteinID:
XP_042408351
LinkDB
All DBs
Position
6A:120631659..120640297
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AA seq
627 aa
AA seq
DB search
MADDFHYSSRPDNKRKFDETEDGGVASTPSRKPSGFSAPIASLSPDGGSGGAAPLEQSYN
IVPAPLDGIQLAKQRAQEIAARLFSDAEAKRPRVENGGGSGDSRDTGFGSAASDNTLKPM
SQTLSSQIGPTSHPLSSYGYQGSNKKIEIPNGRVGVIIGKSGETIKYLQLQSGAKIQVTR
DMDADPNSLTRSVEIVGTSEQISRAEQLINDVLAEADSGASATIASRKFGCVPSGVEQFQ
MKVPNNKVGMVIGKGGESIKNMQARSGARIQVIPLHLPPGDTSTERTVYIDGTQEQIEIA
KQLVNDVTSENRVRNPAMTGGYSQHGYNVPRPPTSWGPPGAPPVQQPGYGYMPPGVYPGP
PPTYNMPQAPYEGYPPSSGWDQTSSQPQQTAPGTGYDYYNQQSQQQQQSYPQTGRGNVQD
GYSSAYNANAQQPGYSQTTTNTQGGYDQQGYGSTLNYGTMAASSQDGSANASGAQGGSTQ
APPAQPPLSQPLNHTSYPPQGTTPSGYGQVAPPSYGQPPQAQAPPNSQSLYRQGQAPSAP
ASYMQSALLQPSCGQSTLPQSVYGQQQSYGVPPHSQSGYGNQQQTPYNNSYASGGNSQTH
AYSNDNVAQGSYDTAAVATPSTNAPAP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgactttcactactcttctcgacccgataacaagcgaaagttcgacgagacg
gaagatggcggcgtcgcttcgacgccctcgaggaagccttctggcttctcggctccgatc
gcgtcgttgtctcctgacggaggttccggtggagctgctccccttgagcaatcttacaac
atcgtccccgcgcccctcgacggaatccagctcgccaagcagcgtgcccaggagatcgct
gcgaggttattcagtgacgccgaggccaagcgccctagggtcgagaacggcggaggatca
ggcgattcgagggacaccggttttggatctgctgccagtgacaatacactgaagcccatg
agccaaacattatcttctcaaattggacccacttcccacccattatcctcttatggctat
cagggttcaaacaaaaagattgagattccaaatggaagggttggtgtaattattggcaaa
agtggagagactataaaataccttcagcttcaatcaggagcaaagattcaagtaacgaga
gatatggatgctgatcctaattcactgaccaggtcagtagaaattgttggtacatctgaa
cagattagcagagctgagcagttaattaatgatgtgcttgctgaggctgattctggggct
tctgcaacaattgcttctcgaaaatttggttgtgttccatcaggcgtggagcaatttcag
atgaaggttccaaacaacaaggtaggcatggtgattggtaaaggtggcgagtccataaaa
aatatgcaagcaaggtctggtgcacgcatacaggtgatacctctgcacttgcctcctggt
gatacatccactgaaagaacagtatatattgatggcacacaggagcagattgaaatagca
aaacagttggtcaatgatgttactagtgagaatcgtgtcagaaacccagctatgactggt
gggtattctcagcatgggtacaatgtgcctcgtcctcccactagctgggggccacctggt
gcgccaccggtgcagcaacctggttatggttacatgccacctggagtttatcctgggcca
ccacccacatataatatgccccaggcaccttatgaaggctatcctccctcttctggctgg
gaccaaacttccagtcaacctcaacaaactgcaccaggcactggatacgattactacaat
caacaatcccaacagcaacaacagtcgtatcctcagacaggacgaggtaatgtgcaggat
ggatattcgagtgcgtataatgccaatgcacagcaaccgggttattctcagactacaaca
aacacgcaaggtggttatgatcagcagggttatggctctacacttaactatggcacaatg
gctgcctcatctcaagatggatctgctaatgcttctggtgctcagggtgggtcaactcaa
gcacctcctgctcaacctccattgagtcaaccactaaatcacacaagctatcctccacaa
ggaacgactccatctggatatggtcaagtagcgccacctagttatgggcagccacctcag
gcccaggcaccaccaaattctcagtctctttatagacaaggtcaagctccgtctgctcca
gccagttatatgcaatctgctcttctgcaaccaagttgtggtcagtccacacttcctcaa
tctgtttacgggcaacagcaatcatatggtgtaccaccacatagccaatcaggttatgga
aatcaacagcagacaccatataataactcgtatgccagtggtggaaattcccagactcat
gcatactctaatgacaatgtagctcaagggtcttacgatactgctgctgttgctacacct
tcaaccaacgcacctgcaccttga
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