Zingiber officinale (ginger): 121997842
Help
Entry
121997842 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121997842
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121997842
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121997842
03036 Chromosome and associated proteins [BR:
zof03036
]
121997842
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121997842
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121997842
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121997842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
121997842
NCBI-ProteinID:
XP_042408415
LinkDB
All DBs
Position
6A:complement(122626260..122631199)
Genome browser
AA seq
491 aa
AA seq
DB search
MLNKFMKRGSRKGAKLDAAEPGGNVTVNHASRSAMPSVSPSTGAPVAAGGGGSLNQLPTS
TAGSAATQIESLPLFRDVSVPEQQALFLRKLQICAAAFDFSETLGLAREREVKRQTLSEL
VDFVQSGSGRLAESVQEELVRTVAANIFRCLPPRSYENTGSEVTDPEEDDPFLDPAWSHL
QLVYELLLRYIVSSDTDTKVAKRYIDHSFVLHLLDLFESEDPREREYLKTILHRIYGKFM
VHRPFIRKAINNIFYKFIFEIERHSGISELLEILGSIINGFALPMKEEHKLFLVRALIPL
HKPKSVGLYHQQLSYCIVQFVDKDYKLADIVIRGLLKYWPVTNCQKEVLFLGELEEVLEA
TQPAEFQRCMAPLFKQIARCLSSSHFQVAERALFFWNNDHIVSLIAQNRREILPIIYKAL
EMNMEGHWNQAINGLTANVRKMFLDMDSDLFEACQRQYVEKQVKAKSLEEQRDLLWRRLE
AAAGEDMVIVN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaattcatgaagcgcggttcccgcaagggcgctaagctggacgcagcagag
cctggcggcaatgtcaccgtcaaccatgcctcccgctccgctatgccctccgtctccccc
tccaccggcgctcctgtcgccgccggcggcggcggcagtctgaatcaactaccaacctcc
actgctggcagcgccgccacgcagatcgagtccctccctctctttcgcgacgtgtcggtg
cccgagcagcaggcgctgttcctccgcaagctccagatctgcgccgcggcgtttgacttc
tccgagacgctcgggttggcccgtgagagggaggtgaagcggcagaccttgtcggagctc
gtcgacttcgtgcagtctggctccggcaggctcgctgaatccgtgcaggaggagctcgtc
cgcaccgtcgccgccaacatcttccgctgcctcccgccgcgttcttacgagaacaccggc
tccgaggtcaccgaccccgaggaggacgatcctttcctagaccctgcttggtcacacctt
cagctcgtctatgaactcctcctgcgctacatcgtatcgtcggacaccgacactaaggtt
gccaagcgctacatcgaccactcctttgtgctccaccttctggacctcttcgaatcggag
gaccctcgcgaacgtgaatatctcaagaccatcctgcaccgcatctacggaaagttcatg
gtacaccgccctttcatccgcaaggccatcaacaatatcttctacaaattcatttttgag
atcgagaggcacagcggcattagtgagctgttggagatacttgggagcataatcaacggc
ttcgcactgcctatgaaggaggaacataagttgttccttgtccgtgcgctcatcccactg
cataagccgaagtcggttgggctgtaccaccagcagctctcctactgtatcgtgcagttt
gtcgataaggattataagctagcggatatagtcattaggggacttttgaagtattggcct
gttactaattgccaaaaggaggtgcttttcctcggggagttagaagaggtattggaggca
actcaacctgcagagttccagcggtgcatggctcccttattcaagcagattgctcgctgt
ctcagcagctctcattttcaggttgcagaaagggctttatttttctggaacaatgatcat
atagtgagcttaatcgcccaaaaccggagggaaatacttcccatcatatacaaagcacta
gagatgaacatggagggccactggaaccaagcgattaacggccttacggctaatgtccgc
aagatgttcctcgacatggacagtgatctgttcgaggcatgtcaacgccagtatgtagaa
aagcaagtaaaggccaaatccctggaagagcaaagagacttgttgtggagaagactggag
gctgctgcaggagaagacatggttatagtcaattag
DBGET
integrated database retrieval system
