Zingiber officinale (ginger): 121997923
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Entry
121997923 CDS
T08725
Name
(RefSeq) ubiquitin-activating enzyme E1 2-like isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121997923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121997923
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121997923
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
121997923
Ubiquitin system [BR:
zof04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
121997923
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121997923
Exosomal proteins of other body fluids (saliva and urine)
121997923
Exosomal proteins of colorectal cancer cells
121997923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
121997923
NCBI-ProteinID:
XP_042408529
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Position
6A:125241150..125251681
Genome browser
AA seq
1127 aa
AA seq
DB search
MPFTFRLGLGLGLFASLLVGILAVVLEAGRDSGSLLFRGKFLFLILGVGVVSSVLLYMLP
RKRGRGGAEIEGDRPKDEVLGKKARADCLFSAEGTSVMAENNQANGVKVDIVGTKQTDID
EDLHSRQLAVYGRETMRRLFSSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDENVEMWD
LSSNFFLSEDDIGKNRAHACILKLQELNNAVLVSTLSGPLIKEQLSNFQAVVFTDVNLEK
SVEYDEFCHTHNPPICFIRTEVRGLFGNIFCDFGPEFTVLDVDGEEPHTGIIASISNDNP
AIISCVDDERLEFQDGDLVVFSEIEGMTELNDGKPRKIKNARAYSFILEEDTSQFGLYKR
GGIVTQVKEPKVLHFKPLKDAIKDPGDFLLSDFSKFDRPPLLHLAFQALDKFRHDAGRFP
VAGSEDDAQQLIAFAVSINENLGDAKLEQIDKKILQHLANGSRAILNPMAAMFGGIVGQE
IVKACSGKFHPLFQFFYFDSLESLPVEPLEPSDIKPINCRYDAQISVFGSRLQKKLEEAN
TFVVGSGALGCEFLKNLALMGVCCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKST
VAAAASMLINPSLHIEALQNRASPETENVFDDAFWESLNVVINALDNVTARMYIDGRCLY
FQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARS
EFEGLLEKTPNEVNTFLSNPGGYATAMRNAGDAQARDLLEHVLECLEKERCETFQDCVKW
ARLRFEDYFSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLKFSSSDPSNLQFIMAAA
ILRAETFGIPIPEWANNPKKLAAVVDDIILADFQPKAGVNIVTDDKATSLSTASVDDAAV
IDDLIEKLEECAKKLPPGFRMTPIQFEKDDDTNYHMDVITGLANMRARNYSIPEVDKLKA
KFIAGRIIPAIATSTAMATGLVCLELYKVLAGGHKLEDYRNTFANLALPLFSMAEPVPPK
TMKHRDMSWTVWDRWTVEGDLTLRELLQWLKEKGLSAYSISCGTSLLYNSMFPKHRDRMD
RKIVELVKEIAKVEVPPYRRHVDVVVACEDEEDGSDVDIPLVSIYFR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcacgtttcggctagggttgggtttgggtcttttcgcttcgcttctcgtcggg
atcctcgcggtggttctcgaggcaggccgcgacagcggatccttgttgttccgtggtaaa
ttcttgtttctgatccttggggtgggggttgtgagcagcgtgctgctctatatgcttccg
agaaaaagaggtcgaggaggagctgagatcgaaggggaccggccaaaagacgaggttttg
gggaagaaggccagggcggattgcctgttctcggcggaggggacctcggtgatggcggag
aacaaccaggccaacggagtgaaggtagatatcgttggaactaagcagaccgatattgat
gaggacttgcatagccgtcagctggccgtgtacgggcgggagaccatgcgccggcttttc
tcttcgaatgttcttgtttcaggtctacagggcctcggggccgagattgcgaagaatctt
gttcttgctggtgtaaaatcagttaccttgcatgatgatgagaatgtagaaatgtgggac
ttatctagcaatttcttcttatctgaagacgatattggaaaaaatagagctcatgcatgt
attctgaagctccaagaacttaacaatgctgttctagtttctaccttgagtggaccacta
attaaggagcaactctcaaattttcaggctgttgtttttactgatgtgaacttggaaaag
tctgtggaatatgatgagttttgtcacactcataatcctccaatttgctttatcagaact
gaagttcgaggactctttggcaatatcttttgtgattttggcccagaattcactgttctt
gatgttgatggcgaagagccacatactggtataattgcatccattagcaatgacaatcca
gcaattatatcctgtgttgatgatgagcggcttgaattccaggatggagatcttgttgtc
ttctctgaaattgaggggatgacagagttaaatgatggaaaaccccgaaaaataaaaaat
gcaagggcatattcgtttattcttgaggaagacacaagtcagtttgggctatacaagaga
ggtggaattgttacacaggtaaaggaacctaaggtcctccatttcaaacctctaaaagat
gctattaaagatccaggggactttctcctaagcgacttctccaaatttgaccgcccacct
cttctacatttggcctttcaagccttggataagtttaggcacgatgctggacgttttcct
gtcgctggatcagaagatgatgcacaacaacttattgcttttgctgtcagtattaatgaa
aaccttggtgatgccaagctggaacagattgacaagaaaattttgcagcatcttgctaat
ggttcccgtgctattttgaatcccatggctgcaatgtttggaggtattgttggccaagag
attgtcaaggcttgctcaggaaagtttcatccactttttcagttcttttactttgattca
cttgaatccctacctgttgagccattggagccaagtgacataaaaccaattaattgtaga
tatgatgcccagatttctgtatttggatccaggctgcaaaagaagctggaagaggccaac
acttttgttgtaggatctggtgccctaggttgtgagttcttgaagaacttagcattaatg
ggagtttgctgcagcccaaaagggaagctgacaatcactgatgatgatgtcattgaaaaa
agtaatctgagtcggcaatttctcttcagagactggaatattgggcaagctaaatcaaca
gtagctgctgctgcttcaatgttaataaacccatctctccatattgaggctcttcagaat
cgagcaagcccagagactgaaaatgtgtttgatgatgcattttgggagagcttaaatgta
gttattaatgcactggacaatgtaactgccagaatgtacattgatggtcggtgcttgtac
ttccagaagccacttctagaatctggaactctaggtgcaaagtgtaatacacagatggta
attcctcatttaactgagaattatggagcctccagagatccacctgaaaaacaggcacct
atgtgcacagttcactcatttcctcataatattgatcactgtttgacatgggcccggtct
gagtttgagggtttgcttgagaaaacacccaatgaggtaaacaccttcctttctaatcca
ggtggatatgctactgctatgagaaacgcaggtgatgcacaggctagagatcttcttgaa
catgttcttgaatgtcttgagaaggaaagatgtgagacatttcaggattgtgtcaaatgg
gcacggctgaggtttgaagattacttctccaaccgtgtgaagcaattaacattcactttc
cctgaagatgcagccaccagcacaggtgcacccttctggtctgcacctaaacgttttcca
cgacccttgaaattctcatctagtgaccctagcaaccttcagtttattatggctgctgct
attcttagagctgagacatttggaattcccattcctgaatgggctaataatcccaagaaa
ttagctgctgttgttgatgacataatactcgctgatttccagcccaaagcaggggttaac
attgtaacagatgacaaggccactagcttgtctactgcttctgttgatgatgcagctgtg
attgatgaccttattgagaagctggaagagtgtgctaagaagttgcccccaggatttcgt
atgactccaattcaatttgagaaggatgatgacacaaactaccatatggatgtcatcact
gggctcgcaaacatgcgcgcaagaaattacagcattccagaagttgataagctgaaggcc
aaattcatcgctgggaggatcatcccagcaattgctacatcaacagctatggccactggc
cttgtgtgcttggagctttacaaagtcttagctggtggacacaagttggaggactatcgg
aatacatttgccaacctcgccctccctctgttttccatggctgagccagtccctccaaag
accatgaaacaccgagatatgagctggacagtttgggatcgctggaccgttgaaggtgac
ctcaccctcagggagctgctccagtggctcaaggagaagggattaagtgcttacagcatt
tcctgtggcacttcattactatacaacagcatgtttcccaagcacagggatagaatggat
cggaagattgttgaacttgtgaaggagatcgctaaggtcgaagtgcctccatataggcga
catgtggatgtcgtggtggcatgtgaagatgaagaggatggaagtgacgtagacatcccg
ctagtatccatctatttccggtag
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