KEGG   Zingiber officinale (ginger): 121998092
Entry
121998092         CDS       T08725                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121998092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    121998092
   03041 Spliceosome [BR:zof03041]
    121998092
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121998092
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121998092
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121998092
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 OB_RNB
Other DBs
NCBI-GeneID: 121998092
NCBI-ProteinID: XP_042408777
LinkDB
Position
6A:complement(130491065..130495636)
AA seq 378 aa
MEIAEGNQNGADEFEGEYDVEEIEEEVEEYEEVDDDEEELGDRDGGVGRSAVEGEGVGDR
DTSGITPRKRSENVDNSGEEMKQADAGSSSAGKIFVGGVAWDTAEETFSNHFSKYGEITD
SVIMMDKNTHMPRGFGFVTFADPSIIDKVLEDEHVIDGRTVEVKRTVPREEMPSKAGIKT
KKIFVGGIPTSLTGDELKEHFSTYGEVVDHQIMFDHATGRSRGFGFVTFKDEESVDVIIS
KGKMHDLDGKQVEIKRAEPKRSGGNPRMNERASYDARSGSSSGYRANSYGFGGGRYDMYY
GGGGGTSYGYGRGYGYGGVPSYGAGYVANYGGYMYGGGGFNGSNMYGGPGGYGGWYGSYG
SGSGRGGGYGSRYHPYTK
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggagatcgctgaggggaaccagaacggggccgacgagttcgagggcgagtacgatgtc
gaggagattgaagaagaggtcgaggaatatgaagaagtggatgatgatgaagaagaattg
ggagaccgagacggaggcgtcggtcgtagtgcggtagaaggagaaggagttggagataga
gatacaagtggaatcacaccgcggaagagatcggaaaatgtggataacagtggagaggag
atgaagcaagctgatgctggttcctcttcagcaggaaaaatctttgttggcggtgttgct
tgggatactgcggaagaaacattcagtaatcatttcagcaagtatggggagatcactgat
tctgtcataatgatggacaagaacacacacatgccaagagggtttgggtttgtcacattt
gctgacccatctattattgacaaggttttggaggatgagcatgtcatagacgggagaact
gtagaagttaaaagaactgttccaagagaagaaatgccttccaaagcaggaatcaagaca
aagaaaatcttcgtgggagggatacccacatcactaactggagatgagcttaaggaacac
ttttccacgtatggtgaagtagttgatcaccaaataatgtttgaccatgctactggtcga
tcaaggggttttggttttgtgaccttcaaagatgaagaatctgttgatgtaattatttct
aagggcaagatgcatgatctcgacggaaaacaagttgaaatcaagcgggccgaaccaaag
agatcaggtggcaatccgagaatgaacgagagggccagttatgatgctcgcagtggaagc
agcagtggataccgagcaaactcttatggctttggtggtggtcgttatgacatgtattat
ggcggcggcggcggcacaagttatggttatggcagaggctatggctatggtggtgttcct
agttatggcgctggttacgtagctaactatggtggctacatgtatggaggtggcggattc
aacggcagcaatatgtacggtggcccaggtggctacggtgggtggtatggtagttatggc
agtggcagtggcagaggaggaggttacggaagcaggtaccacccatacaccaaatga

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