Zingiber officinale (ginger): 121998137
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Entry
121998137 CDS
T08725
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121998137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121998137
03016 Transfer RNA biogenesis [BR:
zof03016
]
121998137
03012 Translation factors [BR:
zof03012
]
121998137
04131 Membrane trafficking [BR:
zof04131
]
121998137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121998137
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121998137
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121998137
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
121998137
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121998137
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121998137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
121998137
NCBI-ProteinID:
XP_042408835
LinkDB
All DBs
Position
6A:131542868..131546845
Genome browser
AA seq
433 aa
AA seq
DB search
MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLVNEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKFLKNGDAGFVKMIPTKQMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDP
TGAKVTKAAAKKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaaggttcacataagcattgtggtcattggccatgtcgactctggcaaa
tccaccacaactggccatcttatttacaagcttgggggtattgacaagcgtgtgattgaa
aggtttgagaaagaagcagctgagatgaataaaaggtctttcaaatatgcttgggttctc
gacaagcttaaggctgagcgggagcgtggcatcaccattgatattgctctttggaaattt
gagaccacaaagtactactgcactgttattgatgcacctggacaccgtgacttcattaag
aacatgatcactggaacctctcaggctgactgtgctgttctcattattgattctaccact
ggtggttttgaggcaggtatttcaaaggatggacagacacgagaacatgcccttcttgct
ttcactctgggtgtgaaacagatgatttgctgctgcaacaagatggatgctactacccca
aaatactcaaaggcacgatatgatgaaatcgtcaaggaggtctcctcttacctcaagaaa
gttggttacaaccctgacaagattccttttgttcccatttctggttttgaaggtgataac
atgattgagaggtctaccaacctggactggtacaagggtccgacccttcttgaggccctt
gacttggttaatgagccaaagagacccaccgacaagccccttcgcttgcctctccaggat
gtctacaagattggaggtattggaactgtccctgttgggcgagttgagactggtgtgctt
aaacctggtatggttgtcacttttggccctactggtctgaccactgaagtcaagtcagtg
gagatgcaccacgaggcgttgcaagaggctcttcctggtgacaatgttgggttcaatgtt
aagaatgttgcagtcaaggatctcaagcgtggctttgttgcttccaactccaaggatgac
cctgcaaaggaggcagctaattttacatctcaggttatcatcatgaaccaccctggccag
attggcaacggatatgccccagtgctcgactgccacacctcccacattgccgtcaagttt
gctgaaattcttaccaagttccttaagaacggtgatgctggattcgttaagatgattccc
accaaacaaatggtggtggagaccttctctgagtacccaccacttggacgtttcgccgtg
agggacatgagacaaaccgttgctgttggtgtcatcaagagcgtcgagaagaaggatcca
actggggccaaggttactaaggctgctgccaagaagaaatga
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