Zingiber officinale (ginger): 121998213
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Entry
121998213 CDS
T08725
Name
(RefSeq) transcription factor E2FB-like isoform X1
KO
K06620
transcription factor E2F3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121998213
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
121998213
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
Leu_zip
TrmB
TMF_DNA_bd
COG3_N
Pkinase_C
Motif
Other DBs
NCBI-GeneID:
121998213
NCBI-ProteinID:
XP_042408941
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All DBs
Position
6A:complement(133232456..133241498)
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AA seq
477 aa
AA seq
DB search
MTGGEEAGNRSEQQLAQIFKPPKQYLPISSSKPPFCSPDEYHRFDSLQGSNDEMVDALVL
QTPLKRKSVQEDNDIINVSEWTTSPQYSVGVTSPLLTPVSEKGRKTNNRSKVAKHNKLEA
LTPVSNIGLPSGDNLTPVGTCRYDSSLGLLTKKFINLLKHSQDGILDLNKAAEILKVQKR
RIYDITNVLEGIGLIEKKFKNRICWKGVDDLDPVEVHGDVSLLQAEIEKLTFEERKLDDL
ISQMREKLREFTEEENNQKWLFVTEDDIKGLPCFQNVTLIAIKAPHGTTLEVPDPDEAGE
YLHRRYRIVLRSTMGPVDVYLVSQFEEKFDELSDMNTPPKLPPASNSSSVDNSIVPCNAE
ESIGIGMDVDIQQNERIWFDLNSSQDFSGGMMKIVPSEIDMQMLASLICGKLHQRFNGIA
WQDSMHVILLQMALVLLYHELHQELRSLQMQIPPRDECWLDVLVEVGSHQPLIGSCQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtggggaggaagctgggaatcgatcggaacagcagctggcgcagatcttcaag
ccgccgaagcagtacttgccgatttcctcatcaaaaccacctttttgttctcctgatgag
taccacaggttcgacagcctgcaagggtccaatgacgagatggtcgatgccctagtctta
caaactcctttgaagcgaaagtctgtgcaagaagataatgacattataaatgtaagtgaa
tggacaaccagcccacagtattctgtaggagttactagtcctctactcacaccagtatct
gagaaaggaaggaagacaaacaataggtccaaggttgcaaaacacaataagcttgaagct
ctaactcctgtatcaaatattggcttaccttcaggtgataatcttactccagttggtact
tgccgctatgatagctccttagggcttttgaccaaaaagtttatcaacttgctgaaacac
tcacaagatggcatcctcgatttaaataaagctgcggaaatattgaaggtacaaaagagg
aggatttatgatatcactaatgttcttgaaggcattggacttatagaaaagaaatttaaa
aacagaatctgttggaagggtgtagatgacttggatccagttgaggttcatggtgatgtt
tcattattacaggctgaaattgagaaacttacatttgaggagaggaaattagatgatctt
atcagccaaatgagagaaaaattgagggagtttactgaggaagaaaataatcaaaagtgg
ctctttgttactgaagatgatatcaaaggccttccatgctttcagaatgtaaccttaatt
gcaattaaagctcctcatggtactaccctagaagttcctgatcctgatgaggctggagaa
tatctccataggagatataggattgtcttaagaagcactatgggtcctgtagatgtttat
cttgtgagtcaatttgaagagaagtttgatgagttgagtgacatgaatacaccgccaaag
ctccctcctgcatcaaattcaagttctgttgacaactctattgtcccttgtaatgctgaa
gagagcattgggattggaatggatgttgatattcaacaaaatgagaggatatggtttgat
ttgaactcttcacaggattttagtggtggcatgatgaagattgttccttcagagattgat
atgcagatgttagcatcactgatatgtggaaaactgcaccagaggttcaatgggatagca
tggcaagattcaatgcatgtgattttattacagatggcgctagtactcctataccacgaa
ctccatcaggagttgagatcactgcagatgcaaattcctcccagagatgagtgctggttg
gatgtattggtggaagtgggaagccatcaacctcttattggctcatgccagtga
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