Zingiber officinale (ginger): 121998256
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Entry
121998256 CDS
T08725
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121998256
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
121998256
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121998256
03019 Messenger RNA biogenesis [BR:
zof03019
]
121998256
03041 Spliceosome [BR:
zof03041
]
121998256
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121998256
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
121998256
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121998256
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121998256
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121998256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
121998256
NCBI-ProteinID:
XP_042409010
LinkDB
All DBs
Position
6A:136381730..136394121
Genome browser
AA seq
317 aa
AA seq
DB search
MDPKVLDGIIQRLLEVKGSKPGKQVQLLEADIKQLCLVSKEIFLQQPNLLELEAPIKICG
DIHGQFSDLLRLFEYGGLPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLQNL
DQIRNLARPTDVPDSGLLCDLLWSDPNKEVQGWGMNDRGVSYTFGADRVEDFLQKNDLDL
ICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAISDK
KKIGFGATTVSRSGTPW
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggtgttggatggaatcatccaacgactgctggaagtaaagggtagtaag
ccagggaagcaggtgcagctcctagaggcggacatcaagcagctttgtctcgtgtcgaag
gagatcttcctgcagcagcccaacctcctggaactggaggcgcccattaagatttgtggt
gatatccatggtcagttttctgaccttttgaggctttttgaatatggtgggttgccacct
caagccaattacttgttcttgggtgattatgtggaccgtgggaagcagagccttgaaaca
atttgccttcttttagcttacaagattaaatacccagaaaacttctttcttttgcggggt
aatcatgaatgtgcatccataaaccgcatctatggtttctatgatgaatgcaagcgcaga
ttcaatgtgagactctggaagatcttcactgattgttttaattgcctaccagtggcagct
cttattgatgaaaaaatcctgtgcatgcatggtggtctttccccagacttgcaaaatttg
gatcagattagaaacctagctcgcccaactgatgttccagacagcggattactctgcgat
cttctttggtctgatcctaataaagaggtccaaggatggggaatgaatgatcggggtgtt
tcatatacttttggtgctgatagagttgaagactttcttcagaagaatgatttggaccta
atttgtcgtgctcaccaggtggtggaggatggatatgaattttttgctgacaggcaactt
gtaacaatcttctcggctccaaattactgtggtgaatttgacaatgctggtgctatgatg
agtgtggatgagaccttgatgtgctcattccaaattttgaagccagcaatatcagacaag
aagaaaattggttttggtgctacaactgtttccagaagtggaactccttggtag
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integrated database retrieval system
