Zingiber officinale (ginger): 121998583
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Entry
121998583 CDS
T08725
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00531
Glycosaminoglycan degradation
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121998583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zof00536
]
121998583
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
121998583
Glycosaminoglycan binding proteins [BR:
zof00536
]
Heparan sulfate / Heparin
Enzymes
121998583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
121998583
NCBI-ProteinID:
XP_042409496
LinkDB
All DBs
Position
6A:complement(147240005..147242775)
Genome browser
AA seq
518 aa
AA seq
DB search
MRSPFLFLPLFLYFIVQVPAQEHPDVAIIVKGSDLVAEISDTFVCATLDWWPREKCNYYQ
CPWGESSILNLNLSHPFLAKSIRAFSPLRIRVGGSLQDQVVYGMPNLGTPCLPFSKTDDG
LFGFSRGCLSTSRWDEINHLFQKTGVVTTFGLNALYGRHRAQSNQWVGAWNSTNARAFIE
YSISKGYNVDSWEFGNELSGQGVSASVSADQYARDLIALKAVLKVLYRGSRREALLVAPG
GFFDQPWYARLLQASGAGTIDAVTHHIYNLGPGNDPNIRERITDPAYLSGEADTYRALRL
TIQRTGPWSSAWVGEAGGAFNSGSRLVSKAFLNSFWYLDQLGMASKYNTKVYCRQTLIGG
NYGLLDSNTFVPNPDYYSALLWHRLMGKGVLSTDVSGSSYLRAYAHCRKGKEGGVSMLLI
NLSRYTKFSVRVVDVLYGDGEGGRRDDGKREEYHLTAKDGNHLSQTVLLNGTPLEISEEG
DVPPLNPVNAAVRSPVEVAPLSIAFVVLPDFEAKACLR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagatctccgtttctgttcttgccattgttcctctacttcatcgttcaagttcctgct
caagaacacccagatgtggcaatcatagtgaaggggtctgatctagtggccgaaatcagt
gatacttttgtttgcgcgactctcgattggtggccgcgcgagaagtgtaactactatcaa
tgtccatggggagaatcctcaatcctaaatctgaacttgtctcatccatttctcgcaaaa
tccattcgagcttttagcccattgcggataagagtgggaggttccttgcaagatcaagtt
gtgtatggcatgccgaatctagggactccatgccttcctttttcgaagaccgacgacggt
ctctttggcttctctagaggatgcttgagcacctcaaggtgggacgagataaaccaccta
tttcaaaagaccggagtcgtcacgacattcggtctaaatgcactatacgggaggcaccgg
gcacaaagcaatcagtgggtaggagcttggaactccaccaatgctcgagcattcatcgag
tactcgatatcgaaaggatacaatgtagattcatgggaattcggcaatgagttgagcggg
caaggtgtgagtgcgagtgtcagcgccgatcaatacgccagagatttgatcgctctcaaa
gctgtcctgaaagtgctgtacagaggttcgcgacgggaggcgttgttggtcgctcccggc
ggcttcttcgatcagccatggtacgcgcggctcctgcaggcctccggcgccggcacgatc
gacgccgtcacgcatcatatctacaatctgggtccagggaatgatccaaacatacgagaa
aggatcacagatccagcgtacttgagtggggaggcagatacgtacagggctctgcgactc
acaatacagaggactggaccgtggtcctctgcttgggtcggggaagccggcggcgcgttc
aacagcggcagtaggctcgtctcgaaagcattcctcaacagcttctggtacttggatcaa
ctcggcatggcgtccaagtacaacaccaaggtgtactgcagacagacgttgatcggaggg
aactacggtctcctcgactcgaatactttcgttccgaatcctgattactacagtgctctg
ctgtggcatcggctgatggggaaaggagtgctttcgaccgatgtcagtggttcatcgtac
ttgagagcctacgcgcattgcaggaaagggaaagaaggcggcgtctctatgctgctgatc
aatctgagtaggtacaccaagttcagcgtgcgcgtcgtcgacgttctgtatggcgatggt
gaaggcgggcggagggatgatggaaagagagaggagtatcatctgacggcgaaagacggc
aaccatctgagccagaccgttctgctgaacggcactccgttggagatcagtgaagaggga
gacgttcctcctctgaacccggtgaatgctgctgtccgatcgcctgtcgaggtggctccc
ttgtcgattgcgttcgttgtcctcccagactttgaggcaaaagcatgcttgagataa
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