Zingiber officinale (ginger): 121998635
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Entry
121998635 CDS
T08725
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121998635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121998635
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121998635
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121998635
Prokaryotic type
121998635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
121998635
NCBI-ProteinID:
XP_042409555
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All DBs
Position
6A:complement(148061509..148065171)
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AA seq
319 aa
AA seq
DB search
MASSSKALGELLRSPKRLRPISLSTESMPLKSPLSTIHAPPLASGEHPSALTSEQAKRAK
RVDADRSLSRWKRNLSICSERIATRKGTHSDPYVKLGDLLIEETWLEALPGELQKPYAQN
LCRFVEMEMRGSVPIYPPPHLIFNALHLTSFDEVKAVIIGQDPYHGPGQAMGLAFSVPEG
IKIPSSLRNMFKELQQDVGCSLPSHGNLERWALQGILLLNTALTVREHQANSHAKKGWEM
FTDAIIQTISQRKTGVIFLLWGNSAQVKSRLIDESKHHILKAAHPSGLSANRGFFGCRHF
SQTNKILKRLGLSPIDWQL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcctccaaagccctaggcgagctcctccgctcgccgaagcgtctccgcccg
atctccctctccacggaatccatgcccctcaaatcccccctctccaccatccacgcccct
cctctcgcctccggtgaacacccctccgcactcacgtcggagcaggcgaagagggcgaag
agggtcgacgccgaccgatccctttcccgatggaagcggaacctcagtatctgttccgaa
aggatcgcgacaaggaaaggtactcattccgatccctatgtgaagctgggagatctcttg
atcgaggagacatggctggaggctctccccggcgagcttcagaaaccctacgcgcagaac
ctgtgcaggtttgtggagatggagatgcgcggcagcgttcctatctaccctccgccccac
cttatatttaatgctcttcatttgacttcctttgatgaagtcaaggcagtcattattgga
caggatccttaccatggacctggtcaagccatgggtcttgcattctcagtacctgagggc
atcaagattccatcaagtttacgtaacatgtttaaggaacttcaacaagatgttgggtgt
tccttgccatcacatggaaatttagagagatgggctttacagggaatcctgctactgaat
actgcccttacagttagggaacatcaagcaaactcacatgctaagaaggggtgggagatg
tttactgatgctattattcaaacaatttcccagcggaaaacaggagttatcttccttcta
tggggcaactctgcccaagtaaaatctaggttgattgacgagtcgaagcaccatatccta
aaggctgctcatccatctggtctttctgctaacagaggcttctttggatgcaggcacttc
tcgcagacgaataagatattgaagagacttggcctttctcccatcgattggcaactttaa
DBGET
integrated database retrieval system
