Zingiber officinale (ginger): 121998732
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Entry
121998732 CDS
T08725
Name
(RefSeq) THUMP domain-containing protein 1 homolog
KO
K06963
tRNA acetyltransferase TAN1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121998732
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
121998732
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
THUMP
Motif
Other DBs
NCBI-GeneID:
121998732
NCBI-ProteinID:
XP_042409706
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All DBs
Position
6A:complement(149884189..149887776)
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AA seq
346 aa
AA seq
DB search
MADSNKASVNGSKGKKRKYLPHGKPVRKGLYPLRPGVQGFFLTCDGGRERQAANEALNLL
ETFYEELVHGKESDVKSSDVPSKPLNTKIKFSDSDSSSDEEDDAHAEEPTACPQDQEDLQ
TRKDKEDTPAVPHDGEELEIPEHANEREEIPSKKQRVDADARKQEDKPIDELIEEELKEL
GDRKKRHFVSLDSGCNGVIFIQMHKRPGEPGPSKIVQYMMTRIASTRKHMSRFILRFLPV
ELACYASESEISKAIKPLVAEYFPSEAPTPQKFAVLYDARANTSVERMTVINAVAKSVPQ
PHKVDLKNPDKSIIVQIAKTICLIGVVERYKELSKFNLRELTSPKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcaacaaggctagcgtcaacggcagcaaagggaagaagaggaagtacctt
cctcatgggaaacccgtcaggaagggattatatccgctgcgtccaggtgtgcaaggtttt
ttccttacttgcgacggagggagggagcgccaggcggcaaatgaagcccttaatctcctg
gagactttctatgaagagttagtgcatgggaaagagtcggatgtgaaatctagtgatgtt
cctagcaaaccactaaatacgaaaattaaatttagtgattctgattcttctagtgatgaa
gaagatgatgctcatgcggaagaaccaactgcttgcccacaagaccaggaagacctgcaa
acgaggaaggacaaagaagatacccccgctgtcccccatgacggtgaagaattggaaatc
ccagaacatgccaatgaaagggaggagataccatctaagaagcaacgagtagatgcagat
gcccgaaaacaagaggataaacctattgatgagttgattgaagaggagctcaaggagcta
ggagataggaagaagaggcactttgtgagccttgactcgggttgtaatggtgtcatcttt
attcaaatgcacaaacgacctggagagcctggccctagtaaaattgtgcaatacatgatg
actagaattgcttcgacaaggaagcatatgtcaagatttatattgagatttttaccagtt
gagttggcatgttatgcatcagaatcggagatttcaaaagcaatcaaaccattagttgca
gaatactttccgagtgaagctcctactccacaaaagtttgcagtgctatacgatgctcga
gctaataccagtgttgagaggatgacggtcataaatgcagtggcaaaatctgttccccag
cctcataaagtggacctcaaaaacccagataagtccatcatagtacagattgctaagacg
atttgcttgattggagtggttgaaagatacaaggagctttccaagttcaacctgagggaa
ttaacgtcgccaaagcagtaa
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