Zingiber officinale (ginger): 121999402
Help
Entry
121999402 CDS
T08725
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121999402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121999402
Spliceosome [BR:
zof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121999402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
121999402
NCBI-ProteinID:
XP_042410023
LinkDB
All DBs
Position
7A:complement(62093534..62095695)
Genome browser
AA seq
310 aa
AA seq
DB search
MEDSGRINVTMTAREYELFKEAKKRPASEKQQTAASRPRKLPEFPKLESLVHHPIDYARV
VKKIGNEVDLTLVDLEGLLPSTIIMVISVTASTTSGKPLSKENLNKTIDACDRALALDLA
KKKVLDFVESRMGYIAPNLSAIIGSTVAAKFMGIAGGLSALAKMPSCNVQLLGAKKKTLA
GFSTTTSQFRVGYLEQAEIFQSTPPSLRTRACRLLASKSTLAVRVDSTRGDPTGKAGINL
RDEILKKIEKWQEPPPAKKPNPLPVPDSEPKKKRGGRRLRKMKERYAVTDMMKLAKRMQF
GVPEASSLGE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgggcagaatcaacgtaaccatgaccgcgagagaatacgagctcttcaaa
gaagctaagaagcgaccagcttctgaaaagcaacaaactgctgcctcccgaccacgaaag
ttgccggagtttccaaagcttgagtcccttgttcatcatccaattgattatgctcgtgtt
gttaagaagattggaaatgaagtggacttaacccttgttgatttggagggtcttctacct
tcaactattattatggttatttctgtgacagcatcaaccacaagcgggaagcctctttcc
aaagagaatttgaataaaacaattgacgcatgtgatagagcccttgctcttgaccttgca
aaaaagaaagtgcttgattttgttgagagtagaatgggctatattgcaccaaatctttca
gcaattattggaagtacagttgcagctaaatttatgggcattgctggtggtttgtctgca
ttagcaaaaatgccttcttgtaatgttcagcttcttggggcaaagaaaaagacacttgct
ggattttccactacaacctctcaattccgtgtaggttatcttgagcaagctgagattttc
caaagcacccctccttctcttagaactcgtgcttgccggctattggcatcaaaatcaact
ctagctgtaagggtagattctactagaggggatccaacaggaaaggctggaataaacttg
cgagatgaaatccttaaaaagattgaaaaatggcaggaaccaccccctgctaagaaacca
aatcctcttccagttccagattctgagcccaaaaagaagagaggtggccgtcggttgaga
aaaatgaaagaaagatatgcagtgacagatatgatgaagctggcaaaaaggatgcaattt
ggagtgccagaagcgagctctttaggtgagtaa
DBGET
integrated database retrieval system
