Zingiber officinale (ginger): 121999579
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Entry
121999579 CDS
T08725
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121999579
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121999579
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121999579
NCBI-ProteinID:
XP_042410175
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Position
7A:102763863..102765593
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AA seq
435 aa
AA seq
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MEFGVKYFFFYLLFLANAVLLSTAHIAFYDDYWQKKAEEARNNTLNAYVTDPSTVVNHFN
SAPLFDHNSTRRGLGHRAKVKGCLATNPIDRCWRCQPNWVNNRKKLALCAKGFGHDAIGG
LHGKIYVVTDTSDDNLLDPRPGTLRYGVTRDAPLWIVFARDMVIRLQQELMINSYKTIDG
RGANVHIAYGAGLTIQFVSHVIVHNLHIHDIKPSSGGNIRDSETHWGVRTRSDGDGVSIF
GSSHIWVDHLSLSNCADGIIDAIEGSTAITISNCHLTRHNDVILLGASDSYSDDAKMQVT
VAYNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIISQGNRFMGPPNQAA
KEVTHREYGTEAEYAKWNWRSENDQYLNGAVFTQTGHKVSTKYSKLDYIKAKPGSWVARL
TRFSGCLNCKANSPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagttcggcgtcaaatacttcttcttctacctcctcttcctagccaacgctgtgctt
ttgtctaccgcccacatcgccttctacgacgattactggcagaaaaaggccgaggaggca
cgcaataacacgctcaacgcctatgtgaccgaccccagcaccgttgtcaaccacttcaac
tccgcgcctctttttgatcataatagcacgaggagagggctggggcaccgtgcgaaggtg
aagggctgcttggccaccaaccccatcgatcggtgctggaggtgccaaccgaactgggtt
aacaaccgcaagaagctggccctgtgcgcaaaggggttcggccacgacgccatcggcgga
ctccacggaaaaatctacgtggtcacggacacctccgacgacaacctgctcgaccctcgt
cccggcacgctccgctacggagtcacccgcgacgcccccctctggatcgtcttcgcccgc
gacatggtcatccgtctccagcaggagctgatgatcaacagctacaagaccatcgacggc
cgcggcgccaacgtgcacatcgcctacggcgccggcctcaccatccagttcgtcagtcac
gtcatcgtccacaacctgcacatccacgacatcaagcccagctccggcggtaacatccgc
gactccgagacccactggggcgtccgcacccggagcgacggcgacggcgtcagcatcttt
ggctcctcccacatctgggtcgaccacctctccctgtccaactgcgccgacggcatcatc
gacgccatcgaaggctccaccgccatcaccatctccaactgccacctcacccgccacaac
gacgtgatcttattgggcgccagcgactcctactccgacgacgctaaaatgcaggtcacc
gtggcctacaaccacttcggcagaggcctcgtgcagaggatgcccaggtgccgatggggc
tttttccacgtcgtgaacaacgactacacccactggctgatgtacgccatcggcggcagc
atgcatcccaccatcatcagccaaggcaaccgattcatgggcccgccaaatcaagctgcc
aaggaggtgacgcacagggagtacggaacggaagcagagtacgctaaatggaattggagg
tcggagaacgatcagtacctgaacggagcggtcttcacccagacagggcataaagtgtcg
acgaaatactcgaagctcgactacatcaaggcgaagcccgggagttgggtggcgaggttg
actcgcttctcaggatgcctcaattgcaaggcgaacagtccatgttga
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