Zingiber officinale (ginger): 121999840
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Entry
121999840 CDS
T08725
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121999840
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
121999840
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Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
121999840
NCBI-ProteinID:
XP_042410410
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Position
7A:complement(1844822..1846535)
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AA seq
389 aa
AA seq
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MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLIRAWAAACESTGS
PTVSVPAGDFLVHRATFAGPCKSSKITVRIGGTLVAPSGYGGESWIVFDNVEGLLVYGGT
IDGRGGALWACKAAGGRHCPAGATSLKIMNSKDVVLSGLTSVNSERFHVVIHGCEHVTVH
GVRISAAGNSPNTDGIHVQMSTDVIITGASIRTGDDCVSIGPGTTNLWIEQVACGPGHGI
SIGSLGKEYEEKGVENVTVKTTVFTGTENGLRIKTWGRPSQGFVKGVVFENSIMQNVHNP
IIIDQNYCPDHRGCPGKNSGVRISEVTYSDIHGSSATPVAVNFDCSASNPCTGIGLQNIK
LTYGGAAAESCCKHADGEASGLVVPPSCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaactcaaaaaacccgtcattcttctctttctgacgatcatctccgccacgcac
gcctctccgggcgaggtgcacgacatcgtcgactatggtgcgagacccgatcgacctcgg
ttcgactcgtccgattccttgatccgcgcatgggccgcggcctgcgagtcgaccggatcg
ccgaccgtcagtgttccggcgggagacttcttggtccaccgagccaccttcgctggcccc
tgcaagagcagcaagatcaccgttcggattggcggcacgctagtcgcgccgtcgggctac
ggcggcgaaagttggatcgtgttcgacaacgtagaggggctgttggtatacggcgggacc
atcgacggccgaggcggggccttgtgggcttgcaaggccgccggtggtcgccactgcccc
gccggcgccacgtcgttgaagataatgaactcgaaggacgtggtgttgagcgggctgacg
tcggtcaacagcgagcggttccacgtcgtgatccacggatgcgagcacgtgacagtgcac
ggcgtgaggatctcggcggcgggcaatagccccaataccgacggcatccacgtgcagatg
tcgacggacgtcatcattactggcgccagcatcaggaccggcgacgactgcgtctccatc
ggacccggcaccaccaacctctggatagagcaggtggcctgcggaccaggtcacgggatc
agtattgggagtttggggaaggagtacgaggagaagggggtggagaacgtgacggtgaag
acgacggtgtttacgggaacggagaacgggctgaggataaagacgtgggggaggccgagc
cagggtttcgtgaagggggtggtgtttgagaattccatcatgcagaacgtgcacaacccc
atcatcatcgaccaaaactactgccccgaccacagaggatgccctggcaagaattctggc
gtcaggatcagtgaggtaacttacagcgacatccatgggtcgtcagcaacgccggtcgcc
gtgaactttgactgcagcgccagtaacccgtgcaccggaatcggattgcagaacatcaag
ctcacctatggaggggctgcagcggaatcatgctgcaagcacgccgacggcgaggcatcc
ggtttggtcgtgcctccgagctgtctatga
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