Zingiber officinale (ginger): 121999860
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Entry
121999860 CDS
T08725
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121999860
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121999860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_STOP2_C
MMACHC
Motif
Other DBs
NCBI-GeneID:
121999860
NCBI-ProteinID:
XP_042410427
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All DBs
Position
7A:3762403..3763873
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AA seq
368 aa
AA seq
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MQFQNLFNLKNAKEDPQMSATEAISKTFSHSCNPPPPPKKKRNLPGTPDPEAEVIALSPR
TLLASNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGSKESRKRVYVCPEPACVHHN
PSRALGDLTGIKKHFCRKHGEKRWKCDKCAKKYAVLSDWNAHVKTCGSREYRCDCGTLFS
RRDSFITHRAFCDALAEETARVSAAVFNNITSNMDLKPTSFIDVNNGDQVIVEQQQVKQR
ESRGVNTNSAFNNGDLYGSCSNLQQPEGQLSWAGNSTNNHGDIFSLSSTRTVKGANVFAH
GSFPSLFSSLEHNPTLGSDTSATALLQKAAQVGASTIPFLGSLFKEELGGETRDFLGVGM
HPSFSGWL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccaaaatctcttcaacttgaagaacgcaaaagaagatccacaaatgtctgca
acggaagccatctccaaaaccttcagccactcctgcaatcctccaccccctccgaagaag
aagcggaatctccccggaacaccagatcctgaagcggaggtgatcgctctgtctccgaga
acactgttagcgagcaaccgtttcgtgtgcgaaatctgcggcaaggggttccagcgcgac
cagaacctgcaactccaccggcgcggccataacctgccgtggaagctccggcagcgcggc
agcaaggagtcgcggaagcgcgtgtacgtgtgcccggagccggcctgcgtccaccacaac
ccctcccgcgccctcggcgacctcactggcatcaagaagcacttctgccggaagcacggc
gagaagcggtggaagtgcgacaagtgcgccaagaagtatgcggtgctgtcggactggaat
gcccacgtcaagacgtgcggctccagggagtaccgctgcgactgcggcactctcttctcc
aggagagacagtttcatcactcacagggcattttgcgatgccttggctgaggaaaccgca
agagtctcggcggcagtgttcaacaatattaccagcaacatggatctgaagccaacaagc
ttcatcgacgtcaataatggtgatcaggtaatagtagaacagcagcaggtcaagcaaagg
gagtctcgtggagtgaatactaattcagcctttaataatggtgatctctacggctcatgc
tcaaatttgcaacaacctgaaggtcagttgagttgggctggtaacagtactaataaccat
ggtgatatattctcattatcaagcacgagaacggtaaaaggggcaaatgttttcgcccat
gggagcttcccctccctctttagctctctcgagcataacccaacactggggtcggataca
tcggcgacagcattgctgcaaaaagcggcacaagttggtgcttccaccattccattcttg
ggtagcttattcaaggaggagcttggaggagagactagagatttcttaggtgttggaatg
catccctcatttagcggatggctttga
DBGET
integrated database retrieval system
