Zingiber officinale (ginger): 121999907
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Entry
121999907 CDS
T08725
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121999907
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121999907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
ChuX_HutX
Motif
Other DBs
NCBI-GeneID:
121999907
NCBI-ProteinID:
XP_042410468
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All DBs
Position
7A:complement(9038751..9044673)
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AA seq
371 aa
AA seq
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MEEELLETFGAAKKAADRTQNGGEYTEVKRCVSALRRLKKIPVTRKSLVATQVGKKLRLL
TKHSQDEIRTVANDLLQYWKNLVVQEASKNNKKIVPKVEKKIEQAMKLKADRNPKAASTK
SDIVSKLKWVEADKAQNDEVTKLGSVKSEKANSDGFSKDENMEPLSKKPPLDTYSLKLNS
MVKCNDSVRDKIRELIAEAFSRVPKETAESKSDEVRNILDEVDACDPIRVAVSVESALFE
KLGLSTGSQKYKYRSIMFNLRDNNNKDFRRRALLGHVKPQEIATMTTQDMASDDRKAAYK
QLKEKLLFKCERRAAPKATTDQFKCGRCGQRKTTYYQMQTRCADEPMLYYLNQPMTTFVT
CVNCNNHWKFC
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagctcttggagacgttcggggccgcgaaaaaggccgcggacaggacccag
aacggcggggagtacactgaggtgaaacgttgtgtcagtgctctccggaggttgaagaag
ataccggttactaggaagagtttggtggccacccaggttggcaaaaaacttcgccttctg
acaaaacattcccaggatgagattcggaccgtggcaaatgatttgcttcagtactggaag
aatctagttgttcaggaggcatcgaaaaataacaagaaaattgttccaaaggttgaaaag
aaaattgagcaagcaatgaaactcaaggctgacaggaatccaaaagctgcatcaacaaag
agcgacattgtttcaaaattgaagtgggttgaagctgacaaggcacagaatgatgaagtg
accaaactagggtctgtcaaatcagagaaggccaattctgatggcttttccaaggatgag
aatatggaacctctttcaaagaaacctcccttggatacttactcacttaagctgaattca
atggtgaagtgtaacgattctgtgcgtgataagatccgagagcttattgcagaagccttt
tcacgagttcctaaggaaacagctgaaagcaaatcagacgaagtgaggaacatcctggat
gaagtcgatgcatgcgatcctatccgtgtagctgtatctgtggaatctgctctgtttgag
aagttaggcctctcaactggttctcaaaaatacaaatacagatctataatgttcaatttg
agggacaacaataacaaagatttccgacgaagagctctccttggtcatgtgaagccacag
gaaatagcaactatgaccacccaagatatggcgagtgatgatcggaaagcggcctacaaa
cagctaaaggagaagctcttgtttaaatgtgagagacgagcagctcctaaagcaacgact
gatcagttcaaatgtgggcgatgcggacaaaggaagactacgtactatcaaatgcaaacg
cgttgtgccgatgagccaatgttgtattatttaaatcaaccaatgactacttttgttact
tgtgttaactgcaacaaccattggaagttctgttaa
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