Zingiber officinale (ginger): 122000638
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Entry
122000638 CDS
T08725
Name
(RefSeq) protein BTR1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122000638
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122000638
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_Vigilin
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
122000638
NCBI-ProteinID:
XP_042410952
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Position
7A:complement(646723..659647)
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AA seq
339 aa
AA seq
DB search
MEAPKQHRDLSPDTAPRRSHLPRSPTAGDDEKQTHIRILVSNTEAGCIIGKGGSTISEFQ
SQSGARIQLSRNHEVFPGTSDRILLVSGVLGDVIRAMELIQEKLFSELEDGNDAEGRSKV
RLIVPNSSCGAIIGKGGSTIKSFIEESRAGIKISPQDNNAGLNDRLVTLTGLFEEQMRAI
FLILSRLIEDAHYPQTLNSPYQYSGINFPGVPVGYMFPSVAYSPVTYRPNGSGGRNSNNK
GTASPVISHPSRSPGGPQEGQSNSVTIGIADEHIGAVVGRGGRNITEISQVSGARIKISD
RGDFISGTSDRKVTITGSPEAIQTAESMIMQKVSSNTDE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccccaagcagcaccgcgatttgtcccccgatactgcccctcgccgatcgcat
ctccctagatctccaactgcaggagatgacgagaaacaaacacatataagaattcttgta
tctaacacggaagctggctgtatcattggcaagggtggatctacaatatctgaattccag
tcacaatctggagctcgtattcagctgtcacgtaaccatgaagtttttccaggaacatcc
gatagaatattattggtttctggggtacttggagacgttataagggctatggaactgatc
caggaaaaattgttcagtgagttggaagatggcaatgatgctgaaggtagatcaaaagtc
aggcttattgttcctaatagctcatgtggtgctataatcggaaaaggaggttcaactata
aagtcatttatagaagaatcaagggctgggatcaagatatctcctcaggataataatgct
gggctaaatgataggctagttactttaactggactttttgaagaacaaatgcgcgcaatc
tttttgatattgtcaagattaatagaagatgctcactatccacagacattgaattcgcct
taccaatattcaggtattaactttcctggtgttcctgttgggtatatgtttccttctgta
gcatacagtcctgtgacttacagaccaaatggatctggaggaagaaattcaaataacaag
ggcacagcttcacctgttatttcacatccttcacgatcacctggtggacctcaggaaggc
cagagtaattcagtgacaattggaattgctgatgagcatattggtgctgttgttggtcgt
ggaggaaggaacataacagagatcagtcaggttagtggggccaggataaagatatcagat
agaggtgatttcatttctggcacatcggataggaaagtaactattaccggatcacctgaa
gcaatccaaactgctgagtccatgatcatgcaaaaggtttcttcgaacacagacgaatga
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