Zingiber officinale (ginger): 122000675
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Entry
122000675 CDS
T08725
Name
(RefSeq) regulatory-associated protein of TOR 1-like
KO
K07204
regulatory associated protein of mTOR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122000675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122000675
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
122000675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
HEAT
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
HEAT_2
WDR90_beta-prop_4th
HEAT_EZ
Beta-prop_DCAF4
PEP5_VPS11_N
Peptidase_C14
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
122000675
NCBI-ProteinID:
XP_042411024
LinkDB
All DBs
Position
7A:1101373..1117056
Genome browser
AA seq
1356 aa
AA seq
DB search
MALGDLMASRLSVSSPSVSNHLDEFSGREDGGAPVGEREQEAVHATESNLPVTAAAGATS
MAYLPQTVVLSEFRHEGFEDCAEVGPSDSGLVSKWRPKDRLKTGCVALVLCLNIGVDPPD
VIKISPCARMECWIDPHSMAAPKALETIGRALHAQYERWQPRARYKLQLDPTVEEVKKLC
NTCRKYARAERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPINELDSWLKTPSIYVF
DCSAAGMIVKAFLERQDWNTSGSSGSSSKDFILLAACEAHETLPQSVEFPADVFTSCLTT
PIKMALRWFCSRSLLRDSLNYSLIDQIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPHD
LFQRLFRQDLLVASLFRNFLLAERIMRAANCSPVSYPLLPPTHQHHMWDAWDMAAEICLS
KLPQLIADPNADFQSSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQSHRFRAL
VLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTATELRQILVFIWTKILALDKSCQVDLV
KDGGHTYFIRFLDSMDAYPEQRAMAAFVLAVVVDGHRRGQEACIEANLINVCLKHLQIAN
PSDGQTEPLLLQWLCLCLGKLWEDFPEAQVIGLQADAPTIILPLLLEPQPEVRASAAFAL
GTLIDVASVSFGDGHGVDEDFDDDEKIKAELNIIKNLLQLAVDGSPLVRAEVAVALARFA
FSYNKPLKSTAVENWKPLTSQPSLASINHLNNYTPSQFVQVGSSISHIGPVLRGNSESNT
AGREGRISSSSPIASVGIMHGSPLSDDSSHHSDSGILTKEIGSNGVINCSRARPFDNALC
SQFTMALFNMTKDPSPRVANLARRALSIIGIELVVTKAPRLGINHGDSSVPSHTSNLPGL
ARSSSWFDLNAGHISVAFRTPPVSPPRQNYMAGLRRVCSLEFRPHQLNSPDTGLADPLLG
AAGSSGGSERSLLPQSTIYNWSCGHFSRPLLAGADDNEETISRREERERIALDRIVKCQH
SSNVKLANQIASWDTKFETGMKASLLLPFSPIVVAADENEQIRVWNYEEATTLNSFDNHE
SSDRGISKLSLVNELDDSLLLVASSDGNVRFWKNFTERGKQKLVSAFSSLQGHRNAARGT
AAVVDWQQQSGYLYASGGTSSVLLWDLDKEQLVSSIPSSSDSCISALSASQVQGGQFAAG
FVDGTIRIYDIRTPEMPVCTAQPHTQKVEKVVGIGFQPGLDTTKIVSASLAGDIQFLDVR
NQSEPYLTIDAHRGSLAALAIHRHAPIIASGSAKQIVKVFSLKGEQLSIIRYYPTFMAQR
IGSVSCLTFHPYRVLLAIGAADACVSIYADDTYQTR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctgatggcatccaggttgtctgtgtcgtcgccgtccgtttcgaat
catctggatgagttctctggccgggaggatgggggagcgcccgtgggagagagggaacag
gaggcggtgcatgcgactgagagcaacttgccggtgacggcagctgcgggagccaccagc
atggcgtacttgcctcagacagtcgtgctctcagaattccggcatgagggttttgaggat
tgcgccgaggtggggccttcagatagtgggttggtgtcgaagtggcggcccaaggaccgg
cttaagacaggatgcgtggcactcgtgttatgtttaaatattggtgttgacccgcctgat
gttattaaaatatctccttgtgcccggatggagtgttggatagatccacattctatggct
gctccaaaagctcttgaaacaattggaagggcattgcatgctcaatatgagcgctggcaa
cctcgggctcgttataagctccaacttgatcccactgtggaggaagtgaagaagctttgt
aatacttgccggaaatatgccagggcggaaagggttctattccattataatgggcacgga
gtgcctaagcctacagcaaatggagaaatttgggtcttcaacaagagctacacacaatat
attccattaccaatcaatgagcttgactcgtggcttaagacaccttcgatctatgtgttc
gactgttctgcagcagggatgattgtcaaagcctttctagagcgccaagattggaacact
tctggttcttctggttcctcatcaaaggattttattttgcttgctgcttgtgaagcccat
gagacgcttccacagagtgttgaatttcctgctgatgtgttcacatcctgcctcactaca
cctattaaaatggcattgcgttggttttgctctcgatctttgcttcgtgattcactcaac
tactctcttatcgatcaaattcctgggcgtcaaaatgaccgaaagacacttctaggggag
ctgaattggatttttactgctgtcactgacacaattgcatggaatgtccttccccatgat
cttttccaaagactatttaggcaagatctgttagttgcaagtctctttcgcaatttctta
cttgctgagcgaattatgagagctgccaactgctctcctgtttcatatccattgttgccg
ccaactcatcagcatcatatgtgggatgcatgggacatggctgctgaaatttgcttgtct
aaacttccacagttgattgcggatcctaatgctgatttccagtcaagcccattcttcacc
gagcaactcacagcttttgaggtgtggctagaccatggttccgaacacaagaaaccacca
gagcagctaccaatagttcttcaggttttactaagccagtctcatcgattccgggcattg
gttctcttaggaagattccttgatatgggaccttgggctgttgatctggccttatctgtt
ggcatctttccttatgtcctaaagcttttacaaaccactgctactgaattgcgacaaata
ctggtgttcatttggaccaaaattcttgcccttgataagtcttgtcaggtagatctggta
aaagatggcgggcacacatattttatcaggtttcttgatagcatggatgcctatcctgag
cagcgagcaatggctgcttttgtcttggcagttgtagtggacggacatcggcggggacaa
gaagcatgcattgaagcaaatttgataaatgtgtgcctgaagcatttacaaattgctaat
ccaagtgatgggcaaactgagcctttacttcttcaatggctttgtctatgtctgggaaag
ctatgggaagattttccagaagcacaagtcataggtttgcaagctgatgcaccaacaata
attttacctttattattggagccacaacctgaggttagagcttctgctgcttttgctttg
ggaacccttattgatgttgcatctgtctcatttggtgatggacatggcgttgatgaggac
tttgatgatgacgaaaagataaaagctgagctgaatatcattaaaaaccttctacaactt
gctgtggatggaagtcctttggtgcgggctgaggttgctgtagctcttgcccgctttgcc
ttttcttacaacaaacctctcaagtcaactgctgttgaaaattggaagcctctgacctct
cagccttctcttgccagcataaatcatcttaacaactatacacccagccaatttgtgcag
gtgggaagctcaatctcacatattggtcctgtattaagaggaaatagtgagagtaacact
gctggtagagaaggaaggatatcctcaagtagccccattgcatcagttggcataatgcat
ggttctccactctctgatgattcttctcatcattctgattctggtatactgaccaaagaa
attggtagtaatggggtcattaattgctctagagcaagaccttttgacaatgctttatgt
tctcagtttactatggctttgtttaatatgacaaaggatccttctcctcgtgttgcaaac
cttgcccgaagagcactttccataattggtattgaactagtggtcacaaaagctccaagg
ttaggcataaaccatggcgattcttctgttccatctcacacttctaatcttccaggattg
gcgcgctcatcttcgtggtttgacttgaatgctggtcacatatctgtggcattccggacg
cctcctgttagtcctcctcgtcaaaattatatggcaggacttcgccgagtatgctctctc
gagttcaggccacatcaactgaattctccagatactggattagctgatccacttctagga
gctgctggatcttctggtggttctgagcgtagtttacttccacaatcaactatctacaat
tggagttgtggccatttttctagaccacttctcgctggagctgatgacaatgaagaaact
atttctagaagggaagaaagagagaggattgctttagatcgcatagttaaatgccaacat
tcttctaatgtcaaacttgccaatcaaattgctagctgggacactaagtttgaaacaggc
atgaaagcttcactgctcttgcctttttctccaattgtagttgctgctgatgagaatgaa
cagatcagggtatggaattatgaagaagctactactttgaacagttttgataatcatgaa
tcatctgatagagggatatccaagctctcccttgtaaatgaacttgatgacagcttgctt
ctagttgcttcaagtgatggaaatgttcgcttttggaaaaatttcacggaacgagggaaa
caaaaacttgtatcagcattctcttcacttcaaggtcatcggaatgcagctcgtggcaca
gctgctgttgttgattggcagcaacagtctggttatttgtatgcttctggaggcacatca
tctgtcctgctttgggatctggacaaagagcagctagttagctccatcccatcatcatct
gacagttgcatatcagctttgtctgcttctcaagttcagggtggtcaatttgcagctggc
tttgttgatggtactatcaggatatacgacattcgtactcctgaaatgccggtctgcact
gctcagcctcacacacagaaggtagagaaggttgtgggaattggttttcagcctggactt
gatacaactaagattgtcagtgcatcgctagcaggggatatacagttcctggatgttaga
aaccaatctgaaccatatcttaccattgatgcacataggggttcccttgctgccttggca
attcatcggcacgctccaattattgcaagtggttctgctaagcaaattgtgaaggttttc
agtctaaaaggagagcagctaagcatcatcagatattaccctactttcatggctcagaga
ataggttctgttagctgtctcactttccacccgtacagagtactccttgctattggtgct
gccgatgcctgtgtatctatctatgcagatgacacttaccaaacaagatga
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