Zingiber officinale (ginger): 122000732
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Entry
122000732 CDS
T08725
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122000732
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122000732
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122000732
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122000732
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122000732
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122000732
Prokaryotic type
122000732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
122000732
NCBI-ProteinID:
XP_042411104
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All DBs
Position
7A:2251114..2270331
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AA seq
734 aa
AA seq
DB search
MLRCRGCRWFSPLVPPSSFCRLPRHFSRFPLSPVSSMGDSAGRGGSADAKASKSKTSSSP
ISAHKDEVYLDGVIQKRIKLFETIQAQQKAERLKLDGEPIKIKLPDGTIKEGKKWLTSPM
DIAKEISAGLAASALIAQVNGTLWDMTRPLEGDSDLKLFKFDDNEGRDTFWHSSAHILGQ
SLEMEYGCRLCIGPCTTRGEGFYYDAFYDDLTLNEENFNQIQSWASKAAGEKQPFERIEV
TREQALEIFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKAS
ASYWRGKSDRESLQRVYGISFPDSKRLKEYLTQIEEAKKRDHRILGQNQDLFFFHQLSPG
SCFFLPHGTRIYNKLIEFLRAQYRDRGYQEVITPNIYNMQLWETSGHAANYKENMFVFEI
EKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQD
DAHIFCRESQIKEEVKNVLDFISHTYGIFGFTFELELSTRPEKYLGEIEIWDKAEAALGE
ALNEFGRPWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLSYSAEDEA
KLERPVMIHRAILGSVERMLAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYAEQLRDKI
HTAGYYVDADLTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRVRDGSDHSVMSLD
ALLEHFRKEVEAYH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgctccgttgccgcggctgccggtggttctcgcccttagttcctccgtcgtccttctgc
cgtcttccgcgccatttttccagattccctctgtccccggtctcctccatgggagatagc
gctggccgaggtggttctgccgatgccaaagcctccaaatccaaaacctcctcttcaccc
atctccgcccacaaagacgaggtctacctcgacggcgtcatacagaagcgaatcaagcta
ttcgagaccattcaagcccaacagaaggcggagcgcctcaaactcgacggagaacccatc
aaaataaaattgcctgatgggacaatcaaagaagggaagaagtggttgacatcaccaatg
gatattgctaaggagatatcggctggattggctgcaagtgctttaatagctcaagttaat
ggaactctctgggacatgacaagacctcttgagggtgactcagacctcaagttgtttaaa
tttgatgacaatgaagggcgtgacaccttttggcattctagtgctcacattctagggcag
tcccttgagatggagtatggatgcaggctatgcattggaccatgtactactagaggagag
ggtttttactatgatgctttctatgatgacttgacattgaatgaggagaactttaaccaa
attcagtcttgggcaagcaaagctgctggggaaaaacaaccatttgagcgaattgaggtg
acaagggaacaagctcttgaaatatttgctgaaaacaaattcaaggtagaaatcattaat
gaattgcctgaggataagacaatcactgtttatagatgtggccctttggtcgatctttgt
cgtgggcctcatatacccaacacatcttttgtcaaagcatttgcttgtctaaaggcttca
gcttcatattggagagggaaatctgatcgggagagtctacaaagagtctatggtatatca
tttccagattcgaaacgtctcaaggagtatctgacccagatagaggaagcaaagaaacgt
gaccacaggatacttggacagaatcaagaccttttcttttttcaccaacttagtcctggg
agctgcttcttccttccacatggaaccagaatttacaacaagttaattgagttcttgaga
gcccagtacagagatagaggctatcaagaggtcataacaccaaatatatacaatatgcaa
ttgtgggaaacttcaggacatgctgcaaattacaaggaaaacatgtttgttttcgagata
gagaagcaagaatttggactaaaaccaatgaattgtcctggtcattgtttaatgtttgag
caccgagtccgttcatatagagaattgcctcttcgcctagctgattttggagtgctccac
agaaacgagctcagtggtgcacttactggcctaacacgtgttagaaggtttcagcaggat
gatgctcacatattttgcagggagagccagataaaggaggaggtcaagaatgtattggat
tttattagtcatacctatggtatatttgggtttacctttgagttggagttatcaacgcgg
cctgaaaaataccttggagaaatagagatatgggataaagctgaggcggctcttggagaa
gctttaaatgaatttgggaggccatggcagatcaatgaaggagatggtgcattctatggg
ccaaagatcgatattggtgtttttgatgcattgaaaagaaaatttcaatgtgcaactcta
cagttggatttccagcttcctctccgcttcaaattaagttattctgcagaagacgaagct
aaactcgaaagacctgtgatgattcacagagccatcttaggttctgttgaacgaatgtta
gccatccttttagaacactataaaggaaagtggcctttctggcttagccctcgtcaagcc
attgtctgtcctgtgtctgaaaaatcacaaagttatgcagagcagttacgagataagata
cacacagctggttattatgttgatgctgacctaacagacagaaagattcagaaaaaggta
cgagaggctcaattagcacagtacaactacattctggtggttggcgaagaggaagcaaag
actggacaggtaagtgttcgcgtgagagatggatcagatcattctgtaatgagtttggac
gcgctacttgaacatttcaggaaggaagttgaagcctatcattaa
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