Zingiber officinale (ginger): 122000868
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Entry
122000868 CDS
T08725
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase 2-like isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122000868
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
122000868
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122000868
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
122000868
NCBI-ProteinID:
XP_042411284
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Position
7A:complement(7401203..7405556)
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AA seq
416 aa
AA seq
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MEREKPCVAGGSEKDASACWRVLEFYSGIGAMRYSLMRAGIPGCIVEAFDINNVANDVYE
HNFGHRPFQGNIQILSPIDLDKYEAHAWLLSPPCQPYTRQGLKKDSTDARSFSFIKILEN
MPHMKHPPLMLFVENVVGFETSNTHRHMMEVLAGIGFVTQEYILSPLQFGIPYSRPRYFC
LAKREPFAFRNPCFNNSILCTPSPFILSKDAYSTNKLDEANINHENFESVCQPIMTFLET
DLFAQNQQECMREVVVSMVESEYDTDQTPSTTKHLQTTDIDKVYEEAEEGETCINSWNTY
FVPPSLIERWGSAMDIVFPQSKRCCCFTKSYFRYVKGTGSLLATCGHTNSRLEAISLKDL
GLRYFTPREVANFHSFPLDFQFPSHVNLRQRYALLGNSMSVAVVAPLLQYLFSEPT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagaaaaaccgtgcgtagctggaggatcggagaaggatgcttccgcttgttgg
agagtcctcgaattctacagcgggatcggcgcaatgaggtactccttgatgcgggctggt
attccaggatgcatagtggaagctttcgacatcaacaacgtcgccaacgacgtctacgag
cacaactttggccatcgccccttccagggaaacatccaaattttgtcacctattgattta
gacaagtatgaagcacatgcatggcttctttctcctccatgccaaccttacactagacaa
ggcttgaagaaagattcaactgatgctagatcattttcattcatcaagatccttgagaat
atgccacatatgaagcatcctcccctaatgctatttgtggagaatgttgttgggtttgag
acttcaaatacacacaggcatatgatggaagtgttggcaggaattggctttgtcacccaa
gaatatattttgagtccattgcaatttggaatcccatactctagacctcggtacttttgc
ttggctaaaagagaaccttttgcttttaggaatccgtgcttcaataactcaattctttgc
acaccatctcccttcattttatccaaggatgcttactccacaaataagcttgatgaagca
aatataaaccatgaaaattttgagtctgtttgtcagcctatcatgacctttctggaaaca
gatttgtttgcccaaaatcaacaagagtgcatgagagaggttgttgtttccatggtggag
tctgaatatgatactgatcaaacaccaagtacaacgaaacacttgcagaccaccgacatt
gataaagtttatgaagaggctgaagaaggtgaaacttgcataaattcttggaacacatat
tttgttccaccaagtttgatcgaaagatggggaagtgccatggatatcgtcttcccacag
tcaaagcgctgttgttgttttaccaagagttattttcgttatgtaaagggcactgggtcc
ttattggctacttgtgggcacactaactcaaggcttgaagcaatctccttgaaagacctt
ggacttcgttattttactcctcgagaggttgctaattttcattcttttcctctggatttt
caatttccatcacatgtaaacttgaggcaaaggtacgccttgttgggaaacagtatgagt
gttgctgtcgtggctccattactccaatatcttttcagcgaacctacataa
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