Zingiber officinale (ginger): 122000932
Help
Entry
122000932 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122000932
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122000932
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
122000932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122000932
NCBI-ProteinID:
XP_042411370
LinkDB
All DBs
Position
7A:complement(8942409..8946945)
Genome browser
AA seq
520 aa
AA seq
DB search
MADEARARKVLPPGSMAYGGSWWWRTATRTWILRLGSSILIWTVLMQLASVWHPRLPKSS
SAACFDGRGAAASGGGGSGLNASTNLSVLGGEEHALSGTRSAPRVLLPRRLYRSNGYLRV
SCNGGLNQMRAAICDMVSIARFLNLTLVVPELDKTSFWADRSDFGDIFDVDHFINSLRDE
VKIVRALPKKFSTNIHTEVFSMPPVSWSGLKYYLKEILPLIRKHKVVHFNRTDARLANNG
LPLRLQKLRCRVNYKALRFTPAIEALGNKLISILQRNGFFVVLHLRYEMDMLSFSGCTHG
CSAEESEVLTRMRYAYPWWKEKEIISEKKRSEGLCPLTPEETTLVLRALGFASDTLIYIA
SGEIYGGDRRMASLRASYPRILSKEMLLSAEELSSFQNHSTQMAALDYMVSVASGVFVPT
FDGNMAKVVEGHRRYSGFRETIALDRKELVKLLDLLEGGKLSWDQFSTAVRELHKDRMGQ
PTLRKVLPGRPKEEDYFYSNPQECTGPSRIRSIGSRKFDI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggctagggcgcggaaggtcctgcctccggggagcatggcctacggtggg
agctggtggtggcgcacggcgacgcggacgtggatcttgcggttggggtccagcatcctc
atctggacggtgctgatgcaactggcttcagtgtggcatccgcggctccccaagtcatcg
agcgccgcttgcttcgacggccgcggtgccgcagccagcggcggcggcgggagcggtctc
aacgcttccaccaacctttccgtgcttggtggcgaagaacacgccctgtccggaacccgc
tccgcccctcgcgtccttcttccacggagactttacagaagtaatggttatctcagggtg
tcatgcaatggaggcctgaatcagatgcgtgctgcgatatgtgatatggttagtatagcc
cgttttctcaatctaacgcttgtggttcctgaacttgataaaacatctttctgggctgat
cgtagtgattttggggatatattcgatgtagatcactttattaattctttgagagatgaa
gtgaaaattgtaagagcactccctaaaaaatttagcacaaatattcacactgaagtattc
tcaatgcctcctgttagctggtctggtttgaaatactacttgaaggagatcttacctctt
ataaggaaacacaaagtagtccatttcaatagaacagatgcccgtcttgcaaataatgga
ttgcctttacggctccaaaaacttcgttgccgtgttaactacaaggccctaagatttaca
cctgcaattgaagcccttggcaataagctcatctcaattctccagagaaatggattcttt
gttgttcttcacctgcgatacgagatggatatgctctctttctctggttgcacacatgga
tgctctgccgaagagtctgaagttctcacaaggatgagatatgcctatccatggtggaaa
gagaaagaaataatatcagaaaagaaaagatcagaaggtttgtgtccccttacacctgaa
gaaacaacactagtgttacgagccctaggttttgcaagtgacaccctaatttacattgcc
tctggtgaaatctatggtggggacagaaggatggcttccttgagggcttcatatccaaga
atattgagcaaggaaatgcttcttagtgctgaggaattgagctccttccaaaaccattca
actcagatggcagcattggactatatggtttcagttgctagtggtgtctttgtccccacc
tttgatggaaatatggccaaagtggtagaaggacacagaaggtatagtggttttcgtgag
acaattgcgttggatagaaaagaactagtaaaacttttggatcttcttgagggcgggaaa
ctatcctgggatcagttctcgactgctgttagggaattgcacaaggaccggatgggccaa
ccaacattaaggaaggtccttcctggccgaccaaaagaagaggactatttctattccaat
ccgcaagagtgtaccggcccctcaaggatcagaagtattggatcaaggaaattcgacatc
taa
DBGET
integrated database retrieval system
