Zingiber officinale (ginger): 122001010
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Entry
122001010 CDS
T08725
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122001010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122001010
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[C] (Qc)
STX6
122001010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
Motif
Other DBs
NCBI-GeneID:
122001010
NCBI-ProteinID:
XP_042411478
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Position
7A:complement(14822453..14828807)
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AA seq
243 aa
AA seq
DB search
MTPARDPFYIVKEEIQASIDKLQSTFKQWEQAPLDIGERVHLTKELLSSCESIEWQVDEL
DKAIAVAVKDPARYSLDVIELERRRKWTTTSRHQVFNIRRTVQAESKGSLAPNLNGAHHE
LMRHPNDYNSKAGRSDSDTDDFISSESDRQLLLMKQQDEELDELSASVQRIGGIGLTIHD
ELVGQERILDDLSLEMETTSNRLDFVQKKVAVVMKKAGAKGQFMMIGFLIVLFIILFVLV
FFT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgctcgagaccccttttacattgttaaggaagaaattcaggcatcgatcgat
aagttgcaatctacttttaagcaatgggaacaagcaccattagatattggcgagcgtgta
catcttaccaaagagctcctttccagttgtgaaagcattgagtggcaggttgatgaattg
gacaaggcaattgcagttgctgtgaaggatccagctcgttacagtcttgatgtgattgaa
cttgaaagacgtagaaagtggaccaccacttctcgtcatcaggtttttaacatcaggaga
acagtgcaagctgaaagcaagggctcacttgctcctaatctaaatggtgctcaccatgaa
ttaatgaggcatccaaatgattacaattccaaggcagggagatcagattctgacaccgat
gacttcatatcttcagaatcagataggcagctacttttaatgaagcaacaggatgaggag
cttgatgaactcagtgctagtgttcagaggataggtggcatcggccttactatacatgat
gaactagttggacaggaaaggattttggatgatttgagtttggagatggagaccacatcg
aacaggctcgactttgttcagaaaaaagttgctgtggtgatgaagaaggctggtgcgaag
ggtcaattcatgatgatagggtttttgattgtgctcttcatcattctttttgtgttggtg
tttttcacatag
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