Zingiber officinale (ginger): 122001171
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Entry
122001171 CDS
T08725
Name
(RefSeq) DNA topoisomerase 6 subunit A-like
KO
K10878
meiotic recombination protein SPO11
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122001171
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122001171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
122001171
NCBI-ProteinID:
XP_042411710
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Position
7A:complement(23390653..23393038)
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AA seq
436 aa
AA seq
DB search
MSERKRRRSEAAAPVASISDGSTSKKPRKQDSHAQGLRKHLKSDAEILASIREMYEASRS
EVSSSKAVSLSDLNLSSACREVSDRDVASVQVAIERTVLAVARSILAGSGFSFDVPSRAA
SNQLYVPEIDRIVLRDKSSSRPFASLSTVRKATVTARVLSLVYAVLRRDIHITKRDLFYT
DVKLFQDQSQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFTDDGDRIDCTKMGIG
GKAIPPNIDRVGNLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLF
LKRMKTELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGVRPSDLDK
YKVPEQCRLPMTDQDVKAGKDLLEEDFVKKNEGWVKELEIMVKTRQKAEIQALSSFGFQY
LSEVYLPLKLQQRDWL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaggaagcggcgccgctctgaggcggccgcaccggtcgcctctatttcggac
ggttccacctcgaagaaaccccggaagcaggactcccacgcccaagggctgcggaaacat
ctcaagtccgacgccgaaatcctcgcctccattcgcgagatgtacgaagcttcccgatct
gaagtctcctcctccaaggccgtctccctttccgacctcaacctctcttccgcctgccgc
gaggtctccgatcgcgacgttgcctccgtgcaggtcgccatcgagcgcaccgtcctcgcg
gtggcccgatccatccttgctgggagcggcttctccttcgacgtgccctcccgcgctgcc
tccaaccagctttacgtccccgagatcgaccgcatcgtgctccgcgacaaatcatcctcc
cgcccattcgctagtctctccaccgtccgcaaggccaccgttacagcccgcgtgctttcc
ctcgtctacgccgtcctccgccgagacatccacatcactaagcgcgacctcttctacacc
gacgtgaagctcttccaggaccagtcccagtccgatgccgtccttgatgacgtctcttgc
atgctcggatgcacccgatcctccctccacgtcgttgcctccgagaagggtgtcgtcgtt
ggtcgcctcgtcttcactgacgacggtgaccgaattgactgcactaagatgggcatcggc
ggcaaggccattcccccaaacattgaccgggtcggcaacctcgaaagcgacgccctgttc
attcttctcgtagagaaagacgccgcatttatgaggctcgcggaggaccgtttctacaac
aggttcccctgcattatcgtcaccgccaaaggccagccggatgttgctaccaggctcttc
ctcaaacggatgaagactgaactgaagctcccggttctggcactcgtcgacagtgatccc
tacggcctcaagatcctctcagtgtacatgtgtgggtcaaagaatatgtcttacgacagc
tcgaacttgacgactcctgatatcaaatggctgggggttcggcccagcgatctggataaa
tacaaggtgccggagcaatgtcggctccccatgacagatcaagacgtgaaggctgggaaa
gacttgttggaggaggacttcgttaagaagaatgaagggtgggtcaaggagctcgagata
atggtcaagacaaggcaaaaggctgagatacaagcactaagttcatttggattccagtat
ctctctgaggtgtatctacctctgaaattgcagcagagggattggctgtga
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