Zingiber officinale (ginger): 122001252
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Entry
122001252 CDS
T08725
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4-like isoform X1
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00500
Starch and sucrose metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122001252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zof00537
]
122001252
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
122001252
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zof00537
]
Enzymes
122001252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
122001252
NCBI-ProteinID:
XP_042411839
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Position
7A:complement(29396183..29399491)
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AA seq
492 aa
AA seq
DB search
MLSDKYKKVIFSLLFLFSSASGAYVGIYIGTQMSTLPSATEIVSILKTQQIKHVRLFDAD
HQMLNALANTGIEVIVGVPNDQLLRIGESRSDAADWLNKNVATYVPATNITYIAVGNEVL
TTIPNAALVLVPAMQYLQSALLAANLNFQVKVSSPLSMDMIPKHFPPSTASFNSSWNSIM
SQYIQFLKNTGSPLMLNVQPYYGYTEGQGIFPLEYALFEPLNPNNQIVDPNTNFQYTSMF
DAMVDAAYYSMQSLNFSGIPVMVTASGWPSLGGSNEPDANIDNALAYNTNLIRHVRNGSG
TPSQPTTPVSTYVYELFNEDLQPGPVSEKNWGIFSSNGTAFYSLTFSGLVESPANSSTLP
GVFCVANSSADTTALKRGLDWACGTGSANCSAIQPGQPCYQAGNLVALASYAFNDYYHRA
QASGGTCSFGNTAMVTRTDPSHGSCIFAGSTGASNTTEGGTGAFGPVGPSSRASRVQIFS
AFLATFALPFLV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccgacaagtacaagaaagttatattctcgcttctgttcttgttctcaagtgcg
tcaggtgcttatgttgggatttatatcggcactcagatgtccactttaccatcagccact
gaaatagtgtccattctgaaaactcagcagattaaacatgtgcgattgtttgatgctgac
caccaaatgctgaatgccctagcaaatactggaatagaggttatagttggtgtccccaac
gatcagttgctacgaataggagaatcacgatcagatgctgctgactggctgaataaaaat
gtcgccacatatgttcctgcaactaacattacttatattgccgtaggcaatgaagtttta
acaaccatcccaaatgctgctcttgttcttgttccagctatgcagtacctccagtctgct
cttctcgctgcgaatctcaactttcaggttaaagtttcaagtccactatcaatggacatg
attcccaaacattttcctccatcaacagcatccttcaactcatcatggaactccataatg
tctcagtatattcagtttttgaagaacacaggatctcctttgatgctaaatgtgcagcca
tattatggttacaccgagggacaaggtatctttccactagagtacgccctttttgagcca
ctaaatccaaataatcagattgtcgatcctaatacaaatttccagtacacaagcatgttc
gatgcgatggtcgatgctgcttattactcaatgcagtcactcaacttctctggcattcca
gtgatggtgacagcatctggttggccatcactaggtggatcgaatgaaccagatgctaac
atcgataatgcattggcctacaacaccaatcttattcgccatgttcgaaatggttctggc
acacctagccaaccaactacaccagttagtacatacgtctatgagttgttcaatgaggat
ctacaaccagggcctgtttctgaaaagaattgggggatattttcttctaacggaactgca
ttttactctttgacctttagcggtttggtcgagtcacctgctaattcatctaccctgcct
ggtgttttttgtgtcgcaaactctagtgcagataccacagcacttaagagaggattagat
tgggcttgcggaactggttcagcaaactgcagtgctatccaacctgggcaaccatgctat
caggcaggcaatctcgtagcacttgcctcatatgcattcaatgattactaccatcgagct
caagcaagtggtggtacctgcagctttggtaacacggccatggttaccagaacagatcca
agccatggttcatgcatctttgccggaagcacgggggcaagcaacaccactgagggagga
acaggtgcctttggaccagttggcccttctagtcgagcatcaagagtgcagattttctct
gcttttctagcaacttttgcactaccatttctagtttga
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