Zingiber officinale (ginger): 122001256
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Entry
122001256 CDS
T08725
Name
(RefSeq) tubulin alpha-5 chain-like
KO
K07374
tubulin alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04145
Phagosome
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122001256
09142 Cell motility
04814 Motor proteins
122001256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122001256
03036 Chromosome and associated proteins [BR:
zof03036
]
122001256
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122001256
04147 Exosome [BR:
zof04147
]
122001256
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122001256
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122001256
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122001256
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122001256
Exosomal proteins of other body fluids (saliva and urine)
122001256
Exosomal proteins of colorectal cancer cells
122001256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
122001256
NCBI-ProteinID:
XP_042411846
LinkDB
All DBs
Position
7A:complement(29412656..29416083)
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISVHIGQAGIQVGNACWELYCLEHGIQPDGMMPSDTSIGVATDAFNTFFSETSAGK
HVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSN
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGDEDEEPEDF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcataagcgtccacattggtcaggccggcatccaggtcggcaatgcttgc
tgggagctctactgcctcgagcacggcatccagcccgatggcatgatgccgagcgatact
tcaataggagttgcaacagatgcttttaataccttcttcagtgaaaccagtgctggtaag
catgttccaagggccatatttgtagatctggagcccacagtgattgatgaagtgaggacg
ggagcctatcgtcagctcttccacccagagcaactcatctctgggaaggaggatgctgca
aataactttgctcggggccactacacagttggcaaggaaattgttgatctctgccttgat
cgagttcggaaattagcagacaattgcactggtttgcaaggatttttggttttcaatgct
gttggtggtggaactggatctggtttaggttctttgctgcttgaacgcttgtcagtggat
tatgggaagaagtcaaagcttggtttcaccatttatccttctcctcaggtttcaactgca
gttgtggagccatataacagtgtgctttctactcattccttgcttgaacacactgatgtc
gcagttctgctagacaatgaagcgatttatgatatctgcaggagatctctagatattgag
aggccaacttacaccaacttgaaccggttgatttctcaggtcatatcctctttaactacc
tctctgagatttgacggagctattaacgtggatgttactgagttccagaccaatctagtg
ccctatcctagaatccactttatgctctcctcctatgcacccgtcatctctgctgaaaaa
gcataccatgagcaactctctgtccctgaaattacaaatgcagtgtttgagccatcaaac
atgatggcaaaatgtgaccccaggcatggcaaatacatggcttgttgtttgatgtaccgt
ggtgacgttgtgcccaaggatgtgaatgctgctgttgcaaccatcaagacgaagagaact
gtccaatttgtcgactggtgccctactggtttcaagtgtggaattaactatcaggcacca
actgtggttcctggaggtgatttagctaaggtgcaacgtgctgtatgcatgatcagcaat
aacactgctgtggctgaggtgttctcaaggattgatcacaagttcgatctgatgtactcc
aagcgagcgtttgtccattggtacgttggcgaaggcatggaagaaggggagttctctgag
gctcgggaggatttggctgctcttgagaaggactatgaggaagttggagcagagggtgga
gacgaggatgaggaaccagaagacttttaa
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