Zingiber officinale (ginger): 122001275
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Entry
122001275 CDS
T08725
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122001275
03041 Spliceosome [BR:
zof03041
]
122001275
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122001275
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122001275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
122001275
NCBI-ProteinID:
XP_042411868
LinkDB
All DBs
Position
7A:31179535..31188548
Genome browser
AA seq
687 aa
AA seq
DB search
MAEDLHYSSRLDNKRKFEEPGDGGVPSPPARRPSGFSAPIASSSPDGCSGGAAPAQQSYN
SVPPPLDGIQLAKQRAQEIAARLFSDAEAKRPRVENGGGTGDSKDTSFGSAIGDNILKPI
SQKLPSQTSFTSHPLPSYGYQGSSKKIEIPNGRVGVIIGKSGETIKYLQLQSGAKIQVTR
DMDADPNSLTRSVEIVGTSEQISRAEQLINDVLAEADTGASATIASRKLGSVQPGAEQFQ
MKVPNNKVGMVIGKGGETIKSMQARSGARIQVIPLHLPPGDISTERTVYIDGTQEQIEIA
KQLVNEVISENRARNPAMAGGYSQQGYQAPRPTTSWVPPGAPPTQQPGYGYMPPGAYPGP
PPPYNLPHPSYGGYPPGWDQTPNQTSQQTAPATGYDYYNQQSQQQQPSLGGSTTGSAGYN
YGQPLPNYSNQTSYGDAAYPQTSVGQQSYVQDGYSSGYNAPALQPGYPQTTPNPQGGYDQ
QGYSSTLSYGTVAAPSQDGSANAYGAPGGSTQAPPAQQPPLSQPPNNNTAGYPSQATAPS
GYGISPTSQQGYGSQPTAPTGYGQAAPPSYGQPPPAQTPPSQSLYGQGQATSAPAGYMQS
TPVQPGYGQSPVSQSAYSQQQSYNVAPHGQSGYGNQQQPPYSNSYASGGNSQPPAYSSDN
ATQGTYDTSAAAPSAPGGAPATNSHAT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacctccactactcttcgcgactcgataacaagagaaagttcgaggagccg
ggagatggcggcgtcccttcgcctcccgcgaggagaccgtcaggcttctcggcgcctatc
gcctcgtcgtctcctgacggctgttccggaggcgctgctcccgcccaacaatcttacaac
agcgtccctccgccccttgatgggatccagctcgccaagcagcgtgcccaggagatcgct
gcgaggttattcagtgatgctgaggccaaacgccctagggtcgagaatggaggaggaacg
ggcgattcgaaggataccagtttcggatctgccatcggtgacaatatattgaagcctatt
agccaaaaactaccttctcaaaccagcttcacttcccacccattaccctcttatggctat
cagggttcaagtaaaaagattgagattccaaatggaagggttggtgtaatcattgggaaa
agtggagagactataaaataccttcagcttcaatcaggggcaaagattcaagtaacgaga
gatatggatgctgatcccaactcactgactaggtcagtagaaattgtgggtacatctgaa
cagattagcagagctgagcagttaattaatgatgttcttgctgaggctgatactggggct
tcagctacgattgcttctaggaaattgggtagtgttcagcctggtgcagaacaatttcaa
atgaaggttccaaacaacaaggttggtatggtgattggtaaaggtggcgagacaattaaa
agcatgcaagcaaggtctggtgcacgtatacaggtgatacctcttcacttgcctcctggt
gatatatctactgaaagaacagtgtatattgatggcacacaggagcagattgaaatagca
aaacagttggtcaatgaggttattagtgagaatcgtgccagaaatccagctatggctgga
gggtattctcagcagggttaccaggcacctcgtcctacaacaagttgggttccgcctggt
gcaccacccacacagcaacctggttatggttacatgccacctggagcttatcctgggcca
ccgcctccgtataatttgccccacccatcttatggaggctatcctcctggatgggaccaa
acacctaatcaaacttctcagcaaactgcaccagctactggatacgattactataatcaa
caatctcaacagcagcaaccgtctcttgggggatccactactggtagtgcaggctacaac
tatggacagccacttcctaattacagcaatcagacgtcctatggcgatgctgcttaccct
cagacatctgttgggcaacaaagttatgtccaagatggatattctagtgggtataatgcc
cctgcattgcaacctggttatcctcagactacacccaaccctcaaggtggttatgatcag
cagggctatagctctactcttagctatggcacagttgctgctccgtctcaagatggatct
gctaatgcttatggtgctccaggtggatctactcaagcacctcctgctcaacagcctcca
ttgagtcaaccaccaaataacaatactgctggctatccttcacaagcaacagctccatca
ggatatggcatttcacccacatcacagcagggatatgggagccaacccactgcccctact
ggatatggtcaagcagcaccccctagttatggacagcctcctccggcccagacaccacct
tctcagtctctttatgggcaaggccaagctacttccgctccagctggttatatgcaatcc
actcctgtgcaaccaggttatggtcaatctccagtctctcaatccgcttatagtcaacag
caatcttataatgtagcgccacatggccaatcaggttatggcaatcaacagcagccacca
tacagtaattcttacgcgagtggtggtaactcacagcctcctgcatactctagtgacaat
gcaactcaagggacctatgatacttctgctgctgccccttctgcccctggtggtgcacct
gcaacgaattcacatgcaacttga
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