Zingiber officinale (ginger): 122001301
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Entry
122001301 CDS
T08725
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122001301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122001301
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
122001301
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Use1
CREPT
DUF4715
BOS1_GOSR2_MEM11-like_N
DUF16
T7SS_assoc-like
Motif
Other DBs
NCBI-GeneID:
122001301
NCBI-ProteinID:
XP_042411915
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All DBs
Position
7A:complement(33730837..33741354)
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AA seq
341 aa
AA seq
DB search
MNSRAGQTSYRDRTHEFVKAVENCKKSFSSTLNGPSSSTAPNLEGPKSAASIQSEFSRRA
SQIGLGIHQTSQKLAKLAKLAKRTSVFDDPAMEIQELTSVIKKDITALNSVVVDLQLLCN
LQNESGNMSRDTTNHSTTVVNNLKNRLMSTTKEFKEVLTMRTENLKVHESRRQLFSSSAS
KEAANPFLRQQPLVSKGSNESPAPPAPWENDSTSSSPLFPRRKPIGDPSSTQPLIPQQQQ
QQQMVAIQDSYMQSRAEALQSVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLAN
VEGAQGQLLKYLNSISSNRWLMIKIFFVLMVFLMIFLFFVA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaattctagggcggggcaaacgtcatatcgtgatcggacgcatgagttcgttaaggct
gttgagaattgcaagaagtccttctcgtcgactctaaatgggccgagcagcagcactgcg
cctaacttggaaggacctaaatcagcagcctccatccagtcggagttcagcaggagggct
tcgcaaattggacttggtatccatcagacttcacagaaacttgctaagcttgcgaaattg
gcaaaaaggacatcagtttttgatgaccctgctatggagattcaagaattaacctcagtt
atcaagaaggatattactgctttaaatagcgtagttgtagacctgcaactcctctgtaac
ttgcagaatgaaagtggcaatatgtccagggatactaccaatcactctactactgttgtt
aataacttaaagaatcgtttgatgagcactacaaaggagttcaaggaagtattaaccatg
agaactgagaatttgaaggttcatgagagtagaaggcagctgttttcttcatcagcatca
aaggaagcagctaatcctttccttagacagcaaccccttgtttctaaaggaagtaatgag
tctcctgctcccccagcaccatgggaaaatgactcaacatcttcatctcctttgtttcca
aggaggaaaccaattggggacccatcatctacacagcctttaattccgcagcagcaacag
caacaacaaatggttgcaatacaggatagttacatgcagagtagagcggaagctcttcaa
agtgttgagtcaacaattcatgagctgagtaatatttttacacaactagctactatggtt
tcacagcagggagagctagcaatcaggattgatgagaacatggatgacacgttagccaat
gtggaaggagcacaaggtcaactgctgaagtacctcaacagcatatcctcaaataggtgg
ctgatgatcaagatattctttgttcttatggttttccttatgatctttctcttttttgtt
gcataa
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integrated database retrieval system