Zingiber officinale (ginger): 122001327
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Entry
122001327 CDS
T08725
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122001327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122001327
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122001327
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
122001327
NCBI-ProteinID:
XP_042411950
LinkDB
All DBs
Position
7A:37055037..37060138
Genome browser
AA seq
1424 aa
AA seq
DB search
MGRRGIQNSAIDAASPDAGDLACVICSEVSAVLAVMRRNVRWGSRYGSPDEDAGLEHSLI
RSLKSLRRQVFSWGYALSPWSSIEPSLYLRPFLDVVCSDETSAPITGVALSSIYKILMLD
ALDPEAGIGVDAAMHLVVEAVTSCRFEVTDPASEEAVLMKILQVLLAIMRSRASSVLSNQ
HVCTIVNTCFRVVHQAGTKGELLQRFSRQTMHELIRCIFSRLPDLKAGAGSLSVKPEMGA
VDKDQTFGINQEDNANASVGPASTGEEDSHSPVEEAPNGEQIKVEPYGIPCMLEIFHFLC
SLLNIDEHIGITRGTNQIAIYEDVPLFALGMINSVIELGGSSINQHQKLLSLIQDELFRN
LMQLGLSMSPLILSMVCSIALNLYRQLCTELKLQLEAFFSCVILRVAQSRYGATYHQQEV
AMEALVDFCRQRTFMAEMYANFDCDISSSNVFEELANLLSKSAFPVNCPLASTHLLALDG
LIAMVKEMSNRIENASLSSEQTTLELEVFSPFWTLKCEDDSDPNQWVRFVNHMKHIKRRL
MIVADHFNRDPKKGLEFLKGTHLVPENLDPHSVACFFRYTAGLDKNLVGDYLGNHDEFCV
KVLHEFVRTFDFQNLNLDTALRLFLDTFRLPGESQKIQRVLEAFSERYFEQSPEILVDKD
AALVLAYSLIMLNTDQHNAQVKKKMTEEDFIRNNRRINGGNDLPREFLSELYHSICRNEI
RTIPEQVSGFSEMYHSRWINLIRKSKKMSPYIVCDSRPLLDLQMFTIMSGPTVAAISVVF
DNAEHEEILLTCIDGFLTVAKISAHYHLEDALDDLVVSLCKFTTLLDSSFFEEPVTIFAD
DMKARLALETVFSIANSYGDCIRNGWRNILDCILRLHKLGLLPACITSDAADDSETSLDL
VYGKLVPNSLSTSQVQMVTPRKSSGLMGRFTQLLSFDIEDKRLEPDEQQLAAHQRTLQII
EECHIDSIFMESKFLHADSLMQIARALTVAGHPQKVTNSPDDEETAVFCLELLIAITLNN
RDRIGLLWQGVYEHIANIVQSTAVPCALVEKAVFGLLRICQRLLPYKENLVDELLRSLQL
VLKLDARVADAYCENITQEIARLVKANATHMKSQVGWRTIISLLSITARHPEASEVGFEA
LLFIMSEGAHISPANYILLIEASRHFAESRVGLTDRSVRAIDLMAESFNCLFCWSRETRD
AGEEADKISDGIREMWERLIQALRKICLDQREKVRNHALLSLQKCLVGAEGMCLLPSTWL
WAFDQVIFTVLDDLLEIVQNQSPKDYRNMEGTLTHAMKLLSRVFLQLVQELSQQSSFCKL
WLGVIERMEKYMKVKVRGRKSEKLQELIPELLKNILLIMKSKGILSERSTTDEDNLWELA
WLHINNIAPLLQSELLPVQEMEQLHSGVQADLSSPRLVAEPSVG
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgagggatccagaattccgccatcgatgctgcatctccagacgcgggggac
ctcgcctgcgtgatatgctcggaggtgagcgctgttctcgccgtgatgcgccggaatgtt
cggtggggcagccggtatggttcccccgacgaggacgccggactggaacactctctcata
cgttctctcaagtcacttcgccggcaggtcttttcttgggggtacgccctcagcccttgg
agttccattgaaccttccctctatctccgacctttcctcgacgtggtatgctccgacgag
acgagtgctcctattaccggcgtcgcactgtcctcaatctacaaaatccttatgctggac
gccctggatccggaggctggtatcggtgtggatgctgctatgcatttggtggtcgaggcg
gtcaccagctgcaggtttgaggtgacggacccggcgtctgaggaggctgtgttgatgaag
atcctccaggtcctgcttgcaataatgcggagccgagcgtcttctgtgctcagcaatcag
catgtctgcacgattgtcaacacgtgcttccgtgttgtccaccaggcgggcacgaagggg
gagctgctgcagaggttctcgcgtcagaccatgcatgagctcatccgatgcatcttctca
cgcttgcctgatctaaaggctggtgccggatctctttctgtcaagccagagatgggtgca
gttgacaaggaccaaacttttgggatcaaccaagaagataacgcaaatgctagtgttgga
cctgcgagcacaggtgaggaagatagccattcaccagtagaagaagctccaaatggagag
caaattaaagtagaaccgtatggaatcccttgcatgttggaaatattccactttttatgt
tcccttttgaatatagatgagcatatcgggataactcgtggaacaaatcagatagctatt
tatgaggatgtgccactttttgctcttggaatgattaattcagttattgaattagggggt
tcatcaataaaccagcatcagaagttactatcactgatacaagatgagttgtttaggaat
ttgatgcagcttgggttgtccatgagtccacttattttgtccatggtttgcagcatagct
ctgaacctctataggcaattgtgtactgaactcaaattgcagctcgaggcattcttctct
tgtgttatcttgagggttgcacaaagccgatatggggctacataccatcagcaagaggta
gccatggaggctcttgtggacttctgcaggcagagaacatttatggctgaaatgtatgcc
aactttgattgtgacatatcttcaagcaatgtctttgaagaattagctaaccttctatca
aagagtgcatttcctgttaattgccctcttgcttccacacatcttcttgcactggatggt
ttgattgccatggttaaggaaatgtccaataggattgaaaatgcatctctttcttcagaa
caaactacattagaacttgaggtattttctcccttttggacattgaaatgtgaagacgac
tctgacccaaaccagtgggtaaggtttgtcaatcatatgaagcacatcaaaagaagatta
atgattgttgctgatcatttcaatagagaccccaagaaagggttagagtttcttaaagga
actcacctcgtgcctgaaaatctggatccccatagtgtggcatgcttcttcagatataca
gctggattggataaaaaccttgtgggggattacttgggaaatcatgatgaattttgtgtg
aaggtgcttcatgagtttgtccgcacttttgatttccagaatttgaatttggataccgct
cttcgcctttttctagataccttccggttgcctggtgaatctcagaagattcagagggta
ctcgaggctttctcagagcgatactttgaacaatcaccagagattcttgttgacaaggat
gctgcccttgtgctggcttattcacttataatgctcaatactgaccaacataatgcccag
gttaagaagaagatgactgaggaggattttatacggaataatcgtcgcattaatggtgga
aatgatcttccaagggagtttttatcagaactctatcactcaatatgcaggaatgagata
aggacaattcctgaacaggtttctggtttttcagaaatgtatcacagccgttggattaat
cttatccgaaagtccaagaagatgtctccttatattgtttgtgattcccgtcctctcctt
gatcttcaaatgtttacaatcatgtcaggtcccactgttgctgctatctcagtagttttt
gataatgcagaacatgaagaaattcttttgacatgtatagatggctttttgactgtggca
aagatctcagcacactaccatctagaagatgctttagatgatttagtagtgtccctatgc
aaattcacaaccctcttggactcatctttctttgaggaaccagtgaccatatttgcagat
gacatgaaagctagattagcgcttgagacagttttcagtatagcaaattcatatggagac
tgcatacgtaatggctggagaaatatccttgattgcatactaagattgcacaaattgggt
cttcttcctgcttgcattaccagtgatgcagctgacgattctgaaacttctctagattta
gtctatggaaagcttgttcctaactcactttctacctctcaagttcaaatggtcactccc
cgtaaatcctctgggttgatggggagatttacccagctgttatcttttgacattgaagat
aaaaggttggaaccagatgaacagcagcttgctgctcatcagaggacactgcagataata
gaggagtgtcacatcgacagtatattcatggaaagcaagtttttacatgctgattcacta
atgcagattgctagggcccttactgtagccggtcatcctcagaaagttaccaattcacct
gatgatgaagaaactgcagttttttgcttggagctacttattgctatcacattaaacaat
cgagatagaattggactcctctggcaaggtgtatatgagcacatagccaatatagttcag
tctactgcagtaccttgtgctcttgtggaaaaggcagtttttggactcctaagaatttgc
cagaggttactaccttacaaggagaacctggttgatgagcttttaagatcactgcagttg
gttttaaagcttgatgcacgtgttgcagatgcttattgtgagaatattactcaggaaatc
gcacggcttgtgaaggctaatgcaacccatatgaaatctcaggttggttggcggaccata
atttcactgctttctatcacagctcgccacccagaagcttcagaagtgggttttgaagca
cttttgttcattatgtctgaaggagctcacatttcaccggccaactatatccttttgatt
gaagcttcacgtcattttgcagaatctcgtgttggactaacagatagatcagtacgagca
atagatctaatggcagaatcctttaattgtcttttttgctggtctcgtgagactagagat
gctggtgaggaagctgataaaatttcagacggaattagagagatgtgggaaaggcttatc
caagcactgagaaagatctgcctggatcagagagagaaagtaaggaatcatgctttgtta
tctttgcagaaatgcctggtaggagcagaaggaatgtgcctgttaccctcaacatggttg
tgggcctttgatcaagttatatttactgtgcttgatgatttactggagattgtacaaaac
cagtcgccaaaagattaccggaacatggagggcacacttacacatgccatgaagttgcta
tcaagagtgtttttgcagctagttcaagagctttctcagcaaagtagtttctgcaagctg
tggctaggggtcattgagcggatggagaagtacatgaaagttaaggtgagaggtaggaaa
agtgagaaactacaagaactgattcctgaacttctcaagaacattctgttgatcatgaaa
tcaaagggaatcctttcagaaaggagcaccacagatgaagataacttgtgggagttggca
tggcttcatataaacaatattgcacctctattgcagtctgaattgttacctgttcaggaa
atggaacaattacattcaggtgttcaggctgatctgagtagccctaggctagtggctgag
ccctctgttggttag
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