Zingiber officinale (ginger): 122001392
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Entry
122001392 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122001392
00071 Fatty acid degradation
122001392
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122001392
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122001392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122001392
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122001392
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122001392
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122001392
Exosomal proteins of breast cancer cells
122001392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
RRM_PARP14_2
Motif
Other DBs
NCBI-GeneID:
122001392
NCBI-ProteinID:
XP_042412039
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All DBs
Position
7A:47729362..47733681
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AA seq
662 aa
AA seq
DB search
MANFTVQVESGRRGKDGSPSVGPVYRSILAKDAFLSLEPGSNTSWDVFRVAAEKFPMNRM
LGWREMKNGKAGPYLWKTYEEIYQEVVQVGSALSHLGVKPGSKIGIYSANCPNWIVAMEA
CNGYTFICVPLYETLGEGAVEYIVEHAEVVVAFVHETKINRILSKCTSTKHLKVIVSFGS
RTMEQNAAATNIGMKLYSWDEILEMGKENTSDPLPPKPLDICTIMYTSGTSGDPKGVVLT
HECLATYVAGTDLFMKQFEDKMTTDDVYLSFLPLAHILDRTIEEYFFHNGASVGYYQGDI
QALRDDLMELKPTLFAGVPRVFEKVYEGVLKAVSELLPHRRMIFNALYKYKLYWMRLGYS
HKNASPLADLLAFRKVKDRLGGRVRLIISGGAPLNTEIEEFLRVTSCAYVTQGYGLTETC
GVSTVGVPDDMSLVGTVGIAATNTEVRLEEVPEMGYDPLSTPSCGEVCVRGTTIFTGYYK
DPELTKQVMIDGWFHTGDIGEMRPDGVLKIIDRKKNIFKLSQGEYVAVEFLEKTYKVSPI
VEDIWVYGNSFKSVLVAVVTPHEDSVKRWARANGHEGSLYDLCQLGDLKKYILEELKKVA
ETNKLRGFEHIKGIVVDPLPFDIERDLITPTMKKKRAQMLKFYQSDIDKLYQNISAEGKR
YA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttactgttcaagtggagagtggaagaagagggaaagatgggagtccctca
gttggtccagtgtaccgaagtatattagcgaaggatgcgtttctgtctcttgaacctggc
tcgaacacctcatgggatgtcttcagggtggcagcagagaagtttccaatgaacaggatg
ctgggatggcgtgagatgaaaaatgggaaggcagggccttatttatggaaaacatacgag
gagatttaccaagaggtggtgcaagttggttctgcactaagtcatcttggtgtcaaacct
ggttctaaaatagggatctattcagcaaactgtcctaattggatagtggccatggaggct
tgcaacggatacacttttatttgtgttccactctatgagacactgggtgaaggagctgtt
gaatacattgtagagcatgctgaagttgttgttgcttttgttcacgagacgaaaataaac
cgaattctgtccaaatgcacatccactaaacatctcaaagtaattgtttcatttggttcg
agaactatggaacaaaatgctgctgctacaaacatcggaatgaagctgtactcttgggat
gaaattcttgagatgggaaaagaaaacacatcagatccgctgccaccaaaacctcttgat
atatgtacgataatgtacacgagtgggactagtggagatcctaaaggtgtagtgctgact
catgaatgccttgcaacatatgtagcaggaacagacctattcatgaagcaatttgaagac
aagatgacaacagatgatgtctatctttcttttcttccccttgctcacattctcgaccga
acaattgaagagtattttttccacaatggggcttctgttggctattatcaaggggatata
caagctttgagggatgaccttatggagctgaagccaactctcttcgcaggggttcctagg
gtttttgaaaaagtttatgaaggtgtcctaaaggcagtgtcagaactcctaccacataga
aggatgatattcaatgccttatacaaatataaactatattggatgagattaggatattca
cataagaatgcttcacccttggcagatttattggcttttcgcaaggtgaaggataggcta
ggaggccgtgttcgccttataatatcgggaggtgctccattaaatactgagattgaggag
ttcttgcgagtcactagttgtgcttatgttacccaaggctatggtttaacagagacatgt
ggcgtcagcacagttggagttcctgatgacatgtcattggttggcaccgttggcattgca
gctaccaacaccgaggtgcgccttgaagaagttccagaaatgggatatgatccgttgtcg
actccctcttgcggtgaagtatgtgtaagagggacgacaatcttcacagggtactacaaa
gaccctgagttaacaaagcaagtgatgatagatggctggtttcatacaggggatattgga
gagatgagacctgatggggttttgaagattatagacagaaagaagaacatatttaaacta
tcacagggtgaatatgttgcagttgaattcctagagaaaacatataaagtttctccaatt
gtcgaagatatttgggtttatgggaacagcttcaagtctgtgctcgtagcagtggtcacg
ccccatgaggacagtgtgaaaagatgggcacgagcaaatggccatgaaggatctctatat
gacctatgccaactcggagacctgaagaaatatattcttgaagagttgaagaaagttgct
gaaactaacaagcttagaggttttgagcacattaaaggtatcgtagtggatcctttgcca
tttgacattgaacgagaccttattactcctacaatgaagaagaaaagagcacaaatgctc
aagttttatcagtcagatatcgacaaactttatcaaaatatttcagcagaaggcaaaaga
tatgcctga
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