KEGG   Zingiber officinale (ginger): 122001399
Entry
122001399         CDS       T08725                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122001399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122001399
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122001399
SSDB
Motif
Pfam: DUF7885 F-box-like LRR_6 F-box LRR_4 F-box_4
Other DBs
NCBI-GeneID: 122001399
NCBI-ProteinID: XP_042412046
LinkDB
Position
7A:complement(51321145..51327244)
AA seq 368 aa
MVGGRPLTGHLDIWFKHLIVSGGGRKIEKAEDMMVGWKDLPMELLLRILSLLDDQTVIVA
SGVCTSWREALCLGLTKLSLSWCKYHMNSLVQSLAPKFVKLQVLSLRQNHRSQLEDGSVE
IIAGYCHDLRDLDLSKSLKLSDSSLFLLAHGCSRLTKLNISGCEGFSDSALAYLATHCKN
MKTLNLCGCVRAATDRALQAISCNCSKLQYLNLGWCERVSDAGVTSLAAGCHDIKALNLC
GCVQITDESVIALANGCLHLGSLGLYYCKNITDRAMYSLANSRLKRKRGLWQDSSREQGG
LVNLNISQCTALTAVAVQAVCDSFPGLHTCLGRNSLIISGCLNLTSVHCYCAIQTHQASN
IVSADHAY
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggttggtgggaggcctttaacgggacacttggacatttggttcaagcacctcattgtg
tctggtggtggaaggaagatagagaaggcggaagatatgatggtggggtggaaggatctt
ccgatggagcttttactgcgaatactgtctctcttggatgatcaaacggtgattgtggct
tcaggtgtttgtactagctggagagaagctttgtgcttggggctcacaaagctttctcta
tcatggtgcaagtatcacatgaacagtcttgtgcagtcacttgcccccaagtttgtcaag
ctgcaggttttgtctcttagacaaaatcatagatctcagctagaggatggttctgtggag
attattgctggttactgccatgatttgcgggatttggaccttagcaaaagcctcaagctg
agtgacagttctttgtttcttttggctcatggatgctctcgcctgacgaaactcaatatc
agtggatgtgaaggttttagtgattctgctcttgcataccttgctactcactgtaaaaac
atgaaaaccttgaatctttgtggatgtgtgagggctgcaactgacagagctctacaggct
atctcatgcaattgcagtaaactacaatatttaaacttgggctggtgtgagcgtgttagc
gatgctggagttaccagtttggcagcaggctgtcatgatattaaggctttgaacttgtgt
ggttgtgtacaaataacagatgagagtgtgattgcattagcaaatggctgtcttcatcta
ggatctctgggtttgtattactgcaagaacatcacagacagagccatgtactcacttgca
aacagccgcttgaagaggaagcgggggctgtggcaagacagcagtcgcgaacaaggtggg
ctagtgaatctgaacatcagccagtgcacagccttgacagcggttgcggttcaggcagtt
tgtgactcgttcccaggactacatacctgcctggggaggaattccctcatcataagtggc
tgcctaaacctcacttccgtgcattgctattgtgctattcaaactcatcaggccagtaac
atagtctctgcagaccatgcttactag

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