Zingiber officinale (ginger): 122001406
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Entry
122001406 CDS
T08725
Name
(RefSeq) probable ion channel POLLUX isoform X1
KO
K21866
ion channel POLLUX/CASTOR
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122001406
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
122001406
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Castor_Poll_mid
TrkA_C
Motif
Other DBs
NCBI-GeneID:
122001406
NCBI-ProteinID:
XP_042412057
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Position
7A:53818674..53827581
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AA seq
931 aa
AA seq
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MPTSDGDPSYASNSNPSSTSTSYLANGGTRPQLKKSRTINASSSAASSHGSCPPLVRRAA
TATLPLPRKLTVAVDNASDSPANGGVLDRDWFYPSFLGPYAARPRANSRAATVARPAAAS
SGTSKMELPLPPKRLVDRGKVVVSEEVNKELVKRIDERSKNLFSSSSSSSRSPKRNFRFD
NSFILLILTVICAILAISQQRRVLELEKQISNIKKLCNYDDGITHEEVAVLQLDTNSIDS
RTVALYTVVLSLVTPFLLLKCLDHLPHIKSLSKPLTCNEEEVPLKKRIAYRVDVFFSVHP
YAKLLALLFATIFLIGIGGLALYAVSDASLPEALWYSWTFVADSGNHADQVGSGPRIVSV
SISSGGMLIFAMMLGLVSDAISEKVDSWRKGKSEVIESDHILILGWSDKLGSLLKQLAIA
NKSIGGGVVVVLAERDKEEMEIDIAKFEFDFMGTSVICRSGSPLILADLKKVSVSKARAI
IVLASDANADQSDARALRVVLSLNGVKEGLKGHVVVELSDLDNEPLVKLVGGELIETVVA
HDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDMRFEDALISFPDAVPCGV
KVAANGGKILINPDDSYVLKEGDEILVLAEDDDTYSPGPLPEVQRGFLPNVPNPPKYPEK
ILFCGWRRDIDDMIMVLEAFLSPGSELWMFNEVPEKEREKKLTDGGIDLSGLTNIRLVHK
EGNAVIRRHLESLPLETFDSILILADESLEDSVVHSDSRSLATLLLIRDIQSKRLPSKEA
KSSLRYAGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALA
MVAEDKQINRVLEELFAEEGNEMCIRPAEYYLYEQEELSFYDIMVRARQRKEIVIGYRLT
STDHAIINPENKSEVRTWSLDDVFIVISNGD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgagtgacggcgatccgagctacgcctccaactctaacccttcctctacttcg
acgtcctacctcgccaacggtgggactcggccgcagctcaagaagtcccgtaccatcaac
gcctcgtcgtcagccgcctcttcccatggctcctgtccccccttagtccgccgcgctgcc
accgccaccctcccgctccctcggaagctcactgtcgccgtcgacaacgcctccgactcc
ccggcgaatggcggcgtccttgaccgtgactggttttatccttcgttcctcgggccctat
gcggcccggccccgcgccaacagtcgggcggccaccgtggcgcgcccagcggccgcgtcc
tccgggacgagtaagatggagctgccgctgccgccgaagagactggtggatcggggtaaa
gtggtggtgtctgaggaggtgaataaggagttggtgaagcggattgacgaaagaagcaag
aacctattctcttcatcttcttcttcctcccgttctcctaaaaggaacttccggtttgac
aattcttttattcttttaatcctaactgtgatatgcgccattttagcgatttctcagcaa
cgaagggttttagagctcgagaaacagatcagtaatattaagaaactttgcaactatgat
gatggcattactcatgaggaagttgcagttttgcagttagacacaaatagcatcgatagt
aggactgttgcactatatactgtggtgttgtcactcgtaacaccattcctgttactaaaa
tgccttgatcacctccctcacataaagtcactttccaaacccttgacttgcaatgaggag
gaggtccctctcaagaagaggattgcttacagagtggatgtcttcttttctgtgcatcct
tatgctaaacttcttgcacttctttttgctacaatatttcttattggaattggtggtttg
gcactgtatgcggtcagtgatgcaagccttcctgaagctctttggtattcatggaccttt
gtggcagactctgggaaccatgctgaccaggttggctcagggccacgaattgtttcagtg
tcaatcagttcaggaggaatgttgatatttgcaatgatgcttggtcttgtatctgatgcc
atttcagagaaggtggattcttggcgcaagggcaagagtgaggtgattgagagtgatcac
atactaattcttggatggagtgacaaattgggatcccttctcaagcagctagcaattgca
aacaagagcattggtggaggtgttgttgtggttttagctgaaagggacaaggaggaaatg
gaaattgacattgcaaagtttgaatttgacttcatgggtacctcagttatttgtaggagt
gggagtcctctcatactggcagacttgaaaaaggtatcagtttctaaggcaagagctatc
attgttttggcatctgatgcaaatgcagatcaaagtgatgctcgtgctttacgagtggtg
cttagtcttaatggagtgaaagaaggcctaaagggtcatgttgttgtagaactgagtgac
cttgataatgaacctttggtaaaacttgttggtggggagctgattgaaacagttgttgca
catgatgtaatagggcgcttgatgatacaatgtgcacttcaacccggcctagctcagata
tgggaagatatactaggttttgaaaatgctgagttttatataaagaggtggccccagtta
gatgacatgcgttttgaggatgccctaatttcattccctgatgcagtaccctgtggagtt
aaggttgctgcaaatggtgggaaaattctgataaaccctgatgacagttatgttcttaaa
gaaggcgatgaaatccttgttcttgcagaggatgatgatacttattcaccaggacctcta
ccagaggtgcagaggggctttctgcccaacgttcccaaccctccaaaatatccagaaaag
atattattctgtggttggcgtcgtgatattgatgatatgataatggtgctagaggctttt
ctgtcccctggctctgaactctggatgttcaatgaggttcctgagaaggagagggagaaa
aagcttacagatggtggaattgatctttcaggattaacaaatataagacttgttcataaa
gagggaaatgctgttattcgtaggcatttggaaagtttgcctcttgaaacatttgattct
atcttgattcttgcagatgagtctttggaggactctgttgtgcattctgattcacggtct
ctggctacccttctccttattcgggatattcagtccaaacgtcttccatccaaagaggca
aagtcttctttgcgttatgctggcttctcccacagctcctggatacgtgagatgcagcaa
gcttctgacaaatcaataatcattagtgagatattggattcaaggactagaaatcttgtg
tcagtgtcaagaattagcgattatgtactgtcaaatgagctggtgagtatggcgctagct
atggtagctgaagacaaacaaatcaaccgggttcttgaggaactctttgctgaggagggt
aatgaaatgtgcatcaggcctgctgaatattatctgtacgaacaagaggagctttccttt
tatgatataatggttagggctcgccaacggaaggagattgtgattggttatcgtcttacc
agcacagaccatgccataatcaatcctgaaaacaagtcagaggtcaggacttggtcgctt
gacgatgtctttattgtcatctcaaatggtgattag
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