Zingiber officinale (ginger): 122001490
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Entry
122001490 CDS
T08725
Name
(RefSeq) formin-like protein 20
KO
K28090
formin
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122001490
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
122001490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122001490
NCBI-ProteinID:
XP_042412193
LinkDB
All DBs
Position
7A:68675621..68684901
Genome browser
AA seq
2088 aa
AA seq
DB search
MALFRRLFYRKPPDRLLEITDRVYVFDCCFSSETMEEDDYHKYVEEIVFQLREHFPDASF
LVINFEGEVESNISHILSHYDITTRSYPRHYEGCPVLPLEIIHHFLRLCESWLPFERQQN
VLMMHCERGGWPILAFMLASLLLYRRQYSGEQRTLEMVYKQAPKELLQLLSPLNPQPSHI
RYLQYISKIGSDSWPPQDTPFTLDCLILRVVPNFDGRGGCRPIVRVYGQDPLFPADRSSK
LLFSTAKTRKHVRHYRQAENAPIKLNVRCCVQGDLVLECINVDEYLEEEVIMFRVMFNTT
FVQSYILMLTLEDIDIAWDAKDRFPKDFNAEVLFSEFEAGSDSSTEMGVIVEDEMEVGSA
EEFFEAEEIFSSPEWHDGQRDLDMQSAIFSNTLEALVPDRNQLESFTPEQFSLLDDGIIL
PGEGSIEGNMDRAYAKQGKILMDKLIHKTNSKNFSFEEKRRAEKSRKNSESFELRKTCGD
ANENEKMELLLVHNKQSLSSSLSNDEIGKQESMGNAIEFLKSKAHLFHSSQSSDSSLVHE
PSQSHMLSKTRGFFEKEDAEEAIRAVTASTGTTVTCGSLLVPSSSLKTKQVSEAMHTYGR
PVISDALPRSSPPPPPLPPRPPPPPPSPSLSRAKSNISSTSEKIVPSPTLQFTNSRTSSS
VFSTSPQITETLEASPPPVPDPQMLCNSIALIAALSSQLSDQLRSMKMDPLLQSSALNSL
PLNLNLPSVGPSFSSQPHTFQSLIPSHVRPSSSIHSAAAPISNAYLSAPSHPSDSKFTKP
SYTSSVGGRGLSNIPKASSSPLGESVYHSLPLNLPVEKDTFDKEYIGLVNSSSHPGDPSL
LSPPTNIGVKISPPPPPPPPPPWIKYTNKHIADTLPSSCVEVDNASSHLPLMPQIVQPSS
SPRTHNVCLTSSPLGSPPPPSPPLPISPSESVQRTSLPILCSKIVEASHSVQSIGVIEKD
LSPPPPISNLKESQPSPPPTPPPPLLGFCGLPSSLPPAVQSCKTPPPSTLLGNYEEPSSS
SPSSPKNSTQPPMSFPPPPPPPPPPPPPPALPVSHQGRVELADSLLYGGNDKVLFSKQSE
AFGKASSPPPPPPSTNYVQVSTSSSSPLLPLPPVTSCVKSSPLTPPPPPPPPPPPPPPPI
ATTICVQNLPPQLPLLPLISCVQDLQLVPTPQLLPSPSTNYVQGPPPQPSPLLPPTSSEL
GPQSTSIPPPPPPNFAQDLPSQTPPLPPPLPPISCVQSLLVPPPPPSPPPPPMSPPPPTN
CVQYSPPPPYNCCEQAQPLFLFSNTPLAPPPPPLIYGGCAQSYPPPPLLEGCVQPPPPPP
PPPPPRSYEGSSLLIDSSGETPALVSSVGGLEQVSLPPSTASDLGHVLPLLPLPESSQQA
PPSSPPKEFGCPLTPPPPPLKEFGCPPTPPPSSPPKEFGCPPTPPPPPLKEFGCPPTPPP
RPGCFGQVAPPPPPPPPPPPPPPPPSIDFEGSRAPPPPFGGLEGPPLLPLPPPGNFGGAP
PPPPPPPPPSPIGDFGGAPPPPPPPVGFGGAPPPPPSIGGFGGAPPPPPPPVGFGGAPPP
PPLIGSFGGAPTPPPPPGGFGGAPPPPPPIGCFGGAPTPPPPPGGFGGAPPPPPPIGCFG
GAPAPPPPPGGFGRAPPPPLPGGAPLPPPIPGGGPPPPPGGPGAPPPPPGSQGMRGMAPN
PLAGGRGRPMGPGAAARKSPFKPLHWVKVTKAMQGSLWAELQKHADAQSTSGFDVSELET
LFSAVAPKPNGKSEGKNKAAAKSDKVHLVDLRRANNTEIMLTKIKMPLPEMMNAVLELNE
SLLDGDQVENLIKFCPTKEEMELLKGYTGNIESLGKCEQFFLELMTVPRVESKLRVFAFK
IQFNAQMTDIKKSLNTVDSACDEVRNSDKLKEIMKKILYLGNTLNQGTARGSAVGFKLDS
LLKLTDTRATNNKMTLMHYLCKVLAEKFPQLLDFHEAFVSLEAASKIPLKSVAEEQQQIV
KGLEKVEVELKASENDGPVSETFCKTLKEFTSVAAAQVASLTALNTAVAKNADSLALYFG
EDPTRCPFEQVVTTILNFVRLFRRAHEENCKQAEVEKKKAEDKSKEAK
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctttaggaggctcttctaccggaagccgcccgatcgacttctggagatcacc
gatagggtctacgtgttcgattgttgtttttcttcggaaacgatggaagaagacgattac
cacaagtatgtagaggagatcgttttccaactccgcgagcatttccccgacgcttccttc
ctggtcatcaatttcgagggcgaggtggagagcaacatctcccacatcttgtcccactac
gacatcaccacccggagctaccctcgccattacgaaggctgcccggttcttcccctggag
atcatccaccacttcctgcggttgtgcgagagctggctgcccttcgaacggcagcaaaat
gtgctgatgatgcattgcgagcgaggcgggtggccgattctcgccttcatgctcgccagc
ctcctgctttaccggcggcagtacagtggagaacagaggacgctggagatggtgtacaag
caggcgcccaaggaattgcttcaactgttgtctccgttgaaccctcagccttcccatatc
agatacctgcaatacatttccaagattggtagcgattcatggcctcctcaggatactccc
ttcaccttggattgcttgattctgagagtcgtgcccaattttgatggacgaggaggttgc
aggcccatcgtccgtgtctatggtcaggatcctctcttccctgccgacagaagttccaag
cttcttttctccacggccaagacaaggaagcatgttcgccattatagacaggctgaaaat
gcaccaataaagttaaatgtccgctgttgtgttcaaggggatttggtcctcgaatgcatc
aacgtggatgagtatctggaagaagaggtgataatgttcagggtgatgttcaacacgacc
ttcgttcaatcttatattttgatgctaactcttgaggatattgacattgcttgggatgct
aaggaccgctttccaaaggacttcaatgcagaggtactcttttcagagtttgaagccggt
tccgatagttccaccgaaatgggagttatagttgaggatgagatggaagttggctcggca
gaagagttctttgaggcagaagagatctttagtagtcctgaatggcatgatgggcaaagg
gatcttgatatgcagtcagctattttttcaaacacattagaggctttagttcctgacaga
aaccagttggaatcttttactcctgaacaatttagtcttttggacgatgggattattctg
cctggagagggatctatagaaggaaacatggatagagcctatgccaaacaagggaaaatt
ctcatggacaagttgatccacaaaacaaactccaaaaatttctcatttgaagagaaaagg
agagcagaaaagtcaagaaagaattcagaaagttttgaattaagaaagacttgcggggat
gcgaatgaaaacgagaaaatggaactacttcttgtccataacaaacaatcgctgtcttct
tctttatctaatgacgagattggcaagcaggaaagtatggggaatgccattgaatttcta
aaatcaaaggcacacttgttccattccagccaaagcagtgattcaagtttggtacatgag
ccatcacaatctcacatgctgtccaaaactcgtggattttttgagaaggaagatgccgaa
gaagctatacgtgcagttactgcttctacaggcaccactgtaacttgtggatctctgcta
gtgccatcatcatcgcttaaaacgaagcaagtttcagaggcaatgcatacatatggacgg
cctgttatttcagatgctttgcctcgctcatccccaccacctcctccactgccaccacgg
ccaccacctccacctccatcaccatccttatctcgtgccaaatctaatatatcttcaaca
agtgagaagatagttccttccccaacactgcagtttacaaactctcgaacatcatcatct
gtattctctacatctccacagattactgaaacattggaagcttctcctcccccagttcca
gatcctcagatgctatgtaattctattgctctgatcgcggctttatcttcacaattgtct
gatcaacttcggtctatgaaaatggatcctctattgcaatcttcagctttaaattcatta
cctttgaatttaaatctaccttcagtaggcccatccttctcatcccaaccacatactttt
caatctcttattccttcacatgtccgaccctcttcttctattcattctgctgcagctccc
atttctaatgcatatttgtcagcaccatctcatccttctgattctaaatttactaaacct
tcttatacatcatcagtaggtggaagagggttaagtaacattcccaaggcctcttcatct
cctctgggagagagtgtttatcattctctacctttgaatttacctgtagagaaggataca
tttgataaagaatatattggacttgtcaattcctcatcacatccaggtgacccatctcta
ctttctcctccaacaaatataggagttaaaatttcacctccacctccacctccaccccca
cctccatggataaaatatactaacaagcatattgcagacacattaccatcttcttgtgtt
gaagttgacaatgcatcatcacatttacctctgatgccacagatagtgcaaccatcctct
tccccaagaacacataatgtgtgtttaacatcatctccattaggttctccaccacctccg
tcacctccacttccgatttcaccttctgaaagtgttcagagaacatctctaccaatttta
tgtagcaagatagttgaagcttcacattcagtgcaatctattggagtaattgaaaaagac
ctaagtccacctcctcctataagtaatttgaaagaatctcaaccatcaccaccaccaaca
cctcctcctcctcttcttggattttgtgggttaccgtcatctttgccaccagcagtccaa
agttgcaaaaccccacctccatcaactctccttggaaattatgaggaaccttcatcctct
tcaccatcctcccctaaaaattccacacaacctccaatgtcatttccaccaccaccacca
ccacctccacctccacctccacctccagctctgcctgtttcccatcaaggacgtgtagaa
ctagctgattctcttttatatggaggaaatgataaagttttattttcaaaacaatcagaa
gcatttggaaaagcttctagtccacctcctcctcctccttctacaaattatgtacaagtt
tcaacatcatcatcctcaccactattgccattaccgccggttacaagttgtgtaaaaagt
tcaccattaactccaccaccaccaccaccaccaccacctcctcctcctcctcctccaatt
gctactacgatttgtgtgcaaaatttgccaccgcaattgcctttacttcctcttataagt
tgtgtacaagatttacagctagtgcctacaccgcagctactaccatctccttctacaaat
tatgtgcaaggtccaccaccacagccatcgccactgcttcctccaacaagtagtgagcta
ggtccccaatcaacatctatcccaccacctccccctccaaattttgcacaagatttgccg
tcacagaccccaccattgccaccaccactaccacctataagttgtgtgcaaagtttatta
gtacctccgccacctccatcgccacctccgccaccaatgtcgccgccacctcctacaaat
tgtgtgcaatattcaccaccaccaccatataattgttgtgagcaagctcaaccactattt
ctattttcaaatacacctctagcacctccacctccacctcttatatatggaggttgtgct
caatcttatcctccacctcctctattagaaggttgtgttcaacctccccctccccctccc
cctccccctccaccaagaagctatgaaggatcttctctactcattgatagttctggggaa
actccagctctagtttcatctgttggaggattagagcaagtctcacttcccccatcaacc
gcaagtgatcttgggcatgttttacctctactaccacttcctgaaagttctcaacaagcc
ccaccatcatcacctcctaaagaatttgggtgccctcttacaccaccaccacctcctctt
aaagaatttgggtgccctcctacaccaccaccatcatcacctcctaaagaatttgggtgc
cctcctacaccaccaccaccccctcttaaagaatttgggtgtcctcctacaccaccacct
cgtcctggatgttttgggcaagttgcaccaccaccaccaccaccaccacctccacctcca
ccacctccaccaccctcaatagattttgagggctctcgtgctccgccaccaccattcgga
ggtttagaaggtcctcctttactaccgctaccgccccctggaaattttggaggagctccc
cctccccctccccctccccctcccccttcacccattggagattttggaggagctcctcca
ccaccaccaccacctgttggttttggcggagccccacctcctccaccatccattggaggt
tttggaggagctcctcctccaccaccaccacccgttggttttggaggagccccacctcct
cctccactcattggaagtttcggaggagctcctacaccaccaccaccacctggaggtttt
ggaggagctccacctcctcctccacccattggatgttttggaggagctcctacaccacca
ccaccacctggaggttttggaggagctccacctcctcctccacccattggatgtttcgga
ggagctcctgctccaccaccaccacccggtggttttggacgagctccacctcccccgcta
ccaggtggggctccacttccaccgcctatccctggaggtggccctccacctccaccagga
ggccctggggctccgccacctcctccaggttcacaaggaatgagagggatggcaccaaat
cccttggcgggaggaagggggcgccctatgggacccggtgcagcagctcgaaagtcacca
tttaagccattacattgggtgaaagttactaaagcaatgcagggtagcttatgggctgaa
ctacaaaagcatgctgatgctcaaagcacttctgggtttgatgtatcagaacttgaaact
cttttctctgctgttgctccgaagccaaatggaaaatctgaaggaaaaaacaaagccgct
gccaagagcgacaaagttcacttggttgacctaaggcgagccaataatactgaaatcatg
ctaaccaaaatcaagatgccattgcccgagatgatgaatgctgttctagaattgaatgaa
tcacttcttgatggcgatcaagtagaaaacttaataaagttttgtcccacaaaggaagaa
atggagcttcttaagggttacaccggcaatattgaaagtcttggaaaatgcgaacagttc
tttttagagttgatgacagtgccacgagttgaatccaagttgagagtattcgcattcaag
attcagttcaatgcacagatgacagatataaagaagagtttgaacactgttgattctgct
tgtgacgaggttcgcaactccgataagctcaaggaaatcatgaaaaagattttatatctc
ggaaacacactaaaccagggaactgcaagaggatctgcagttggtttcaaattggatagc
cttctaaagcttacggatactcgtgcgactaataacaagatgaccttgatgcattaccta
tgtaaggtccttgctgagaagttcccacaacttctggatttccacgaagcttttgtcagc
ttggaagctgcatcaaagataccattgaaatcggtggcagaagaacagcagcagatagtt
aaggggttagaaaaggttgaagtggaattaaaagcttcagaaaacgatggcccagtatca
gaaactttttgcaagactttgaaggagttcacttcggttgctgcagcacaagtcgcatcc
ttgacagcactaaatactgcagttgctaaaaatgctgattcacttgcgctatatttcggt
gaagaccctacgcgctgcccgttcgaacaagtcgtcactactattctgaattttgtacga
ttgtttcggcgggcacatgaggagaactgcaagcaggctgaggtcgagaagaaaaaagct
gaggacaagtcaaaagaggcaaagtga
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integrated database retrieval system
