Zingiber officinale (ginger): 122001556
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Entry
122001556 CDS
T08725
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122001556
03400 DNA repair and recombination proteins [BR:
zof03400
]
122001556
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122001556
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122001556
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122001556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
AAA
CDC24
DUF1980_C
Motif
Other DBs
NCBI-GeneID:
122001556
NCBI-ProteinID:
XP_042412290
LinkDB
All DBs
Position
7A:complement(75391995..75401720)
Genome browser
AA seq
790 aa
AA seq
DB search
MFADGEKSIEQRCPSNLHSASSIWPSYFPQTEFALSDRRLKLVCQLADFFSTSQADHFLS
QVQDDCGVLSLPMDLQQLRKLCGVDEFYVILDEEPKEAILCMGAAVHMVLPMKKNNYFLE
DIEKINIRLYNYPESMITLKNLKAAYIGKLVSVHGSVVKVSTVRPLVLQMDFACGKCGTV
ITRIFPDGKFSPPIVCSIQGCRSRSFSPVRSSAKPIDFQKIRIQELLTSSSHEEGRVPRT
VDCELTDDLVDSCIPGDVITVIGIIKVINSYIDVGGGRSKNKHQGLYYLYLEAVSIRSLK
SNNTADVQENNSKSGACMLSDFISFSPKDLEFVVKFFEEHGSDVFRTILHSLCPSIYGHE
LVKAGIVLSLFGGVQKHSRDKNKVPIRGDIHIIIVGDPGLGKSQLLQAAASVSPRGIYVC
GNATTNAGLTVAVVKDPMTSDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQC
VSVAKAGLVASLSARTSVLAAANPAGGHYNRAKTVNENLRMSAALLSRFDLAFILLDKPD
EQLDKRVSDHIMALHTRNMGPSTAKKQRMAPSDKNLESSILDGSLASRLRLNTVKDKDFV
PLPVSLLRKYIAYARNFVFPRMSRPAAEILQNFYLRLRDRSTSADGTPITARQLESLVRL
AEARARLDLREEITAEDAKDVVDIMKESLYDKYVDDHGFVDFGRSSGMSQQKEAKRFLSA
LNKQSELQQKDCFSISEIYSLADKISLRVPDIDTFVENLNSVGYLLKKGPKMYQVLSSSY
SHSQSTRSRC
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgacggcgagaagagcatcgaacaacgttgcccttccaatttgcactctgcg
tcgagcatttggcctagttatttcccacaaacggagttcgccttgagcgaccgaaggctc
aagctcgtctgccagctcgcagacttcttctccacttcgcaggccgatcatttcctctcc
caggtgcaagatgattgtggtgtcttgtctctccccatggatttgcaacaattacgcaag
ctatgtggagtcgacgaattttatgtcattttggatgaagagccgaaggaagctattttg
tgcatgggtgctgcagtccacatggttctcccaatgaagaaaaacaattactttctggag
gatatagagaagataaacattcgattgtataactaccctgaatcaatgattacgttaaag
aacttgaaagctgcatatatagggaaactagtttcagtgcatggttcagtcgtcaaagtc
agcacagtaagacctttggttctgcagatggactttgcatgtggaaagtgtggaactgtt
atcacacgcatattccctgatgggaagttttctcccccaatagtctgcagcatccaggga
tgcaggagcaggtcttttagtccagttagatcctctgcaaaaccaatagattttcagaaa
ataagaattcaggaacttcttacatcatccagtcatgaagaaggtcgggtgcctcgcact
gttgattgtgaactaactgatgatcttgttgactcttgtatccctggtgatgtgataact
gtcattggtattataaaagtaataaacagctacatagatgttggaggaggaaggtccaag
aacaagcaccaaggattgtactatctatatttggaagcagtttcgatcagaagcttaaaa
tctaataacactgcagatgttcaagaaaacaattctaaaagtggagcgtgtatgctatct
gattttatctcgttttcacctaaagatcttgaatttgtggtgaaattttttgaggagcat
ggttctgatgtattccgtaccatacttcattccttatgcccttctatctatgggcatgaa
cttgtaaaagctggcattgtactttcattatttgggggagtccaaaagcattctcgggat
aagaacaaggtcccaattcgaggagatattcacatcattattgttggtgatcctggattg
ggtaagagtcaactcctacaagcagcagcatcagtttcccccaggggcatctatgtgtgt
ggcaatgcaactactaatgctggactgactgttgctgttgtgaaagatcctatgacgagt
gattatgcatttgaggctggtgccatggttctcgctgatcgtgggttatgctgcattgat
gagtttgataaaatgtctgctgaacatcaggctctacttgaagcaatggaacaacagtgt
gtctctgttgcaaaggctggtttggtggcaagtttgtcagctcgtacatctgttttggca
gctgcaaatcctgctggtggtcattataatcgtgcaaaaactgtcaatgagaacctaaga
atgagtgctgcactcctctcccgttttgatttggcattcatattgctagacaaaccagat
gagcagctggataagcgtgtctctgaccatataatggcacttcatactagaaatatgggg
ccctcgactgccaagaagcaacggatggctccttctgacaagaacctggagtcaagtatt
ctggatggttctttggcttccaggttaagattgaatactgtgaaagacaaggattttgtt
cccttgcctgtttctcttctccgcaagtacattgcttatgcgagaaattttgtcttccct
aggatgtctagaccagcagctgaaattttgcagaacttctacttgcggctaagagaccgg
agcacctcagctgatggtacacctatcactgctaggcagttggaaagcctagtaaggttg
gcagaagctcgtgctcgattggatctcagagaagaaattactgctgaagatgcaaaggat
gttgttgacatcatgaaagaatctttgtatgacaaatatgtcgatgatcatggctttgtt
gattttggacgaagtagcgggatgagccaacagaaggaagcaaaaaggtttctcagtgca
ctaaacaaacaatctgagttacaacaaaaggattgtttctcaatttccgagatatacagc
ttggccgacaaaatcagcttgcgagttcctgatattgatacctttgtggagaacttgaac
agcgtaggctatcttcttaaaaaagggccaaagatgtatcaggttctgtcttcatcctac
tctcatagtcaatccaccagatcaagatgctga
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