Zingiber officinale (ginger): 122001607
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Entry
122001607 CDS
T08725
Name
(RefSeq) SAC3 family protein C-like isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122001607
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
122001607
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
ThsA_Macro
Motif
Other DBs
NCBI-GeneID:
122001607
NCBI-ProteinID:
XP_042412370
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Position
7A:complement(79096646..79100242)
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AA seq
398 aa
AA seq
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MDRETNRPKKLGFRPSKAPNPSPSSSSPVRLRPREETKRDSTSSIHERRNPVLDEDEETG
SPIFSYLVGTCPDMCPAKERQQRERLRDLSVFERLHGDPSRTSSKLAVKKFCRTMSNAEL
QEVEIRPLPVLRSTLKYLMNLVDTSDQPFEVVHDFVFDRTRSIRQDLTRQNILDDEAICM
YEEMVKFHIESHKKLAMCYTKTDLASLCYLNTEQLMKCLATLFKLFDIHRRSSSLYKNEA
EFYSFYVLLHLGGKIPQMQGSSLSLWYRKLTLSILQSNEMRFSMTLIRYSQLGNFKRFFT
RLEAEASDLQLCLVEPFLSEIRARAISYVNHSGYKLQPYPLKHLSDVLRIKESELEELCH
VCGLETTMDEAGMKTLPVKQTSFSLPKLGLPVHSLSTF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggacagggaaaccaacagacctaagaaattagggtttcgaccaagcaaagctccaaac
ccctctccttcgtcgtccagtcccgtcaggttgcgtcctcgcgaggagaccaaacgcgat
tctaccagttcgatccacgaaaggcggaatcccgtactcgacgaggatgaggagaccggc
tcgccgattttttcctacttggtcggcacctgccccgacatgtgccctgcgaaggagaga
cagcaacgcgagcggctcagagatctatcagtgttcgagaggttacacggggatccttca
agaacttcttcgaaactcgccgtgaagaagttttgtagaactatgtccaatgcagaactg
caggaagtagaaataaggcctctcccagtgttaagaagcacattgaagtatcttatgaac
ttggtcgacacatcagatcaaccatttgaagttgttcatgattttgtttttgatagaaca
aggtctattcgacaagatctcactagacaaaatatccttgatgatgaagcaatttgtatg
tatgaggaaatggtcaagtttcacattgaatcacacaaaaaacttgcaatgtgttacacg
aagactgatttggcttcactgtgctacctcaacactgagcagctgatgaaatgccttgcg
acccttttcaagttgtttgatattcatagaagatctagttcattgtacaagaatgaagcc
gagttttattcattttatgtgcttctccatctagggggcaagatcccccaaatgcagggt
agttcactctctttatggtatcgaaaactaactctttcaattcttcaatcaaatgaaatg
cgcttttccatgacattgatcaggtactctcaattgggcaatttcaaacgtttctttact
agactagaagctgaagcatcagatctccaattgtgtcttgtggagccttttctcagtgag
atccgcgcacgagcaatatcgtatgtcaaccacagcggatacaagctgcagccttaccca
ttgaagcatttgtctgatgttcttagaatcaaggagtcagagctggaagagctttgccat
gtctgtggccttgaaaccactatggatgaagcagggatgaaaacattgcccgtcaaacaa
acaagtttcagcttacccaaactcgggctgccggtccattcgctatcaactttttag
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