KEGG   Zingiber officinale (ginger): 122001633
Entry
122001633         CDS       T08725                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03020  RNA polymerase
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122001633
  09124 Replication and repair
   03420 Nucleotide excision repair
    122001633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    122001633
   03019 Messenger RNA biogenesis [BR:zof03019]
    122001633
   03400 DNA repair and recombination proteins [BR:zof03400]
    122001633
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122001633
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122001633
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122001633
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 122001633
NCBI-ProteinID: XP_042412421
LinkDB
Position
7A:complement(81317222..81321689)
AA seq 177 aa
MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGVTA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacataacacttgagcggaacatgcaacttcacccacgccactttggtccc
cacctccgcgacaagcttgtcgccaagctcatgaaggacgtagagggcacatgcagtgga
cgccatggatttgtggtggccattacaggagtagaggatatagggaagggactcatccgt
gaaggaactggcttcgtgacctttcctgttaagtatcaggcagttgtctttcgccccttc
aagggtgagatcctcgaggccgtggtcaccatggtcaataagatgggcttctttgctgaa
gcaggtcctgtgcagatcttcgtatcaaatcatttgattcctgatgatatggagttccaa
tctggagatatgccaaactacacaacttctgatggatcggtcaaaattcagaaagacagt
gaagtgcggctaaagatcattggtactcgtgtggatgccacagaaattttctgcatcggc
actatcaaagatgatttcttgggtgtcatcaatgatcctggcgtcactgcttag

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