Zingiber officinale (ginger): 122001695
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Entry
122001695 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122001695
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-5
122001695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
122001695
NCBI-ProteinID:
XP_042412521
LinkDB
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Position
7A:86250797..86260916
Genome browser
AA seq
1241 aa
AA seq
DB search
MGRKKNFNINDDEYSLPEEPEQSLPASHGAEVESRPAAGSKKSKKGGKNQGNAAVADDPP
DVLAAAADVVPHQEDEGDVAPLVFSGKKKSSKSKKGNIAGSGFASLNSFGDEADDEEPEE
NAKSKTEPEVGRYAEDEVDESRDFDVEPSRQGNLQDVGSRKQQKKKKKKGGRTAQEEEDL
EKLLLELGEAPASAPTQALPPALVEDGGEEINDPEFESNDPGNEVEEVASKKQQKKKKKK
SGRTAQEEEDLDKILAELGDGPPPAQPSVAAPAPSPEVVEESTPAPVEQPEAADKDGEVE
GESAAAKKKKKKKEKEKEKKAAAAAAAATPSVVTVKDEKKDEAKGKVPDKKLPKHVREMQ
EALVRRKEAEERKKREEEERLRKEEEERKRLEELERQAEEAKRRKKEREKEKLLKKKQEG
KLLTAKQKDEQRRLEAMRKQFLSQNEIPSGDVVPEIKKRPRYDTKKAKQAQHKVSETDKM
MENENEADEPGILQVVEDAIVEEDSKSQAGDAEDKDEGDQGTEDVKALDEDEDDEEWDAK
SWDDLDVTLPSASPFAEEDQEATTKSVVKGTSERVVTSSLELQADLEAPSKLTVKKVVAP
QKTTKTIESNKGVEGERESVKNIKGGKESFKKPESTDVEDKSKTSGPDLRSPICCILGHV
DTGKTKLLDCIRRTNVQEGEAGGITQQIGATYFPTENIRERTKELKADATLKVPGLLVID
TPGHESFSNLRSRGSSLCDIAIVVVDIMHGLEQQTIESLNLLKSRDTEFIVALNKVDRLY
GWKSFPNAPIIKAIKQQSNDVKNEFDMRLTQIITQFKEQGLNTALYYKNREMGETFNIVP
TSAISGEGIPDLLLLLVQWAQKTMEDKLTFVDEVQCTVLEVKVIEGLGTTIDVVLVNGVL
HEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGSYLHHKEIKAAQGVKISAQGLEHAI
AGTSLYVLKPDDDLEELKEIVMQDVEKVMSRIDKSGEGVYVQASTLGSLEALTEFLRSSD
VNIPFCDFSIGPVHKKDVMKASVMLERKKEYATILAFDVKVMADARELAEETGVRIFVAD
IIYHLFDQFKAYIDNLREEKKKESAEEAVFPCVLKIMPNCVFNKKDPIVLGVDVLEGILK
VGTPICIPSREFIDIGRIASIEINHKHVDVATKGQKVAIKMVGTSTEEQQKMYGRHFDID
DELVSHISRKSIDILKANYRDDLSNDEWRLVVRLKTIFKIP
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaagaactttaacatcaacgacgacgagtactccttgccggaggaaccg
gagcagtcactgccagcgagtcatggagcagaggtagaaagccgccccgctgcgggatct
aagaagagtaagaagggcggaaagaaccagggcaacgctgccgtcgctgatgatcctccg
gatgtccttgctgctgcggctgacgtcgttcctcatcaagaggacgaaggtgatgtggcc
cccctagtcttctccggtaagaagaaatcctctaaatctaagaagggtaatatcgctggg
agtgggtttgcatcccttaactcatttggggatgaggcggatgatgaggagccagaagag
aacgcgaaatcgaagaccgaacctgaggttggtcgctatgcggaggatgaggtggatgaa
agcagggattttgacgtggaaccgagtcgtcagggaaatttgcaggatgtaggttcaagg
aagcaacagaagaagaaaaagaaaaagggtggacggactgcccaagaggaggaggactta
gaaaaactcctgcttgagctgggtgaagcccctgcgtctgctccgacccaagcattacct
cctgcattagttgaagatggtggtgaggagatcaatgatcctgaattcgaatcaaacgat
ccagggaatgaagttgaggaagttgcctcaaagaagcagcagaagaaaaagaaaaagaag
agtggaagaactgcccaggaggaggaagacttagataagattctcgctgaacttggggat
ggcccgccaccagcgcaaccaagtgtggcagctccggcaccatctcctgaggtggtggag
gaatcaactccagctcctgtagagcagccagaggctgcggataaagacggggaggttgaa
ggtgagtcagcggctgctaagaagaagaagaagaagaaagagaaggagaaagagaagaaa
gctgcagctgctgctgctgctgcgacaccatctgttgttactgttaaggacgagaagaag
gatgaagcaaagggaaaggttcctgacaagaagttgcccaaacatgtgagggagatgcag
gaagcactggtgaggaggaaggaggcagaagagaggaagaaaagggaagaggaggagagg
cttaggaaggaggaggaagagaggaagcggctagaggaattggagagacaagcggaggag
gcaaaaaggagaaagaaggaaagggaaaaggagaagttgctgaagaagaaacaggagggc
aaacttttgacggctaaacaaaaggatgagcagagaaggctagaggcaatgaggaaacaa
ttcctttctcagaatgagattccaagtggtgatgttgttccagagataaaaaagagaccc
aggtatgatacaaagaaggcgaagcaggctcaacataaggtttctgaaacagacaagatg
atggagaatgagaatgaagcagatgaacctggcatactgcaagttgtggaagatgctata
gttgaagaggactcaaaatctcaagctggggatgctgaagacaaagatgaaggagatcag
ggaacagaagatgttaaagcattggatgaggatgaagatgacgaagaatgggatgcaaag
agttgggatgatcttgatgtgacattgccttctgcaagcccttttgctgaagaggatcag
gaagccacaacaaaatctgtagttaagggaacttctgaacgggtggtaacctcgtctttg
gaacttcaagcagatttagaggcaccttcaaagcttactgtaaaaaaggtggtggctccc
cagaaaactacaaagactattgagtctaacaaaggggttgaaggtgaaagggaatcggtt
aagaatattaaagggggaaaagaatcttttaagaagccagagtcaactgatgtggaggat
aaatccaaaacaagtggtcctgatctccgctcaccgatttgttgcattcttgggcatgta
gataccgggaagaccaagctcttagattgcatccgacgcaccaatgtacaagagggagaa
gctggtggtatcacccagcagattggggctacatattttccaacagaaaatataagggaa
aggacaaaagagttaaaggctgatgcaacactaaaggttccaggtttgcttgtcattgat
accccagggcatgagtccttctccaatctgcggtctagaggttcaagcctgtgtgatatt
gctatagtggttgtggatattatgcatgggcttgagcagcaaactattgaatcacttaac
cttttaaaaagtcgggacacagagtttattgttgcactaaataaggtggatcgactgtat
ggttggaaatcattcccaaatgcacccattatcaaggcaatcaaacaacagtctaacgat
gtgaagaatgaatttgatatgaggcttactcagatcattacccaattcaaagagcagggc
ttgaacacagctctgtactacaagaatagagaaatgggtgaaacattcaacatagttcca
acaagtgcaatcagtggtgaaggcataccagatctactcttattgttggtgcaatgggca
caaaaaacaatggaagataaacttacttttgttgatgaagttcagtgtacagtgttggag
gttaaagtgattgaaggtttagggacaaccatagatgttgtactagtgaatggtgttctt
catgagggtgatcagatagttgtttgtggaatgcagggccccattgtgaccagcattaga
gctttgctgactccccaccccatgaaggagctccgagtgaagggctcgtacttgcatcac
aaagagattaaagcagcccaaggtgtgaagatttctgcacagggccttgaacatgccatt
gcaggcacatccctgtatgtgctaaaacctgatgatgatttggaagaattgaaggaaatt
gtaatgcaggatgtggaaaaggttatgagccggatagacaaaagtggggaaggtgtttat
gtacaagcgtcaacccttgggtcattggaggcacttacagaatttttgagaagctcagat
gtgaacattcctttctgtgattttagcataggtccagtacacaagaaggatgtcatgaag
gccagtgtcatgcttgagaggaagaaagaatatgcaaccattttagcttttgatgttaaa
gtgatggctgatgctcgagagcttgcagaggagactggtgttagaatatttgttgcagac
attatatatcatctgtttgatcagttcaaggcttatattgataatctaagggaagaaaag
aagaaggaaagtgctgaagaggcagtatttccttgtgttctaaagatcatgccaaactgt
gttttcaacaagaaagatcccattgttctgggcgtggatgttcttgaaggaatccttaag
gtaggaacaccaatttgtataccttcaagagaattcatagacatagggagaattgcatcg
attgagattaatcacaagcacgtagatgttgcgacaaaaggacagaaggtggctataaag
atggttggcaccagcactgaagagcagcagaaaatgtatgggaggcattttgatattgat
gatgagcttgtcagtcatatctcaaggaaatcaattgacatattgaaagcaaattatagg
gatgatttgtcaaatgacgagtggaggcttgtggtaaggttaaagacaattttcaagata
ccctga
DBGET
integrated database retrieval system
