Zingiber officinale (ginger): 122001716
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Entry
122001716 CDS
T08725
Name
(RefSeq) golgin candidate 5-like isoform X1
KO
K20286
TATA element modulatory factor
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122001716
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122001716
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
122001716
NCBI-ProteinID:
XP_042412539
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All DBs
Position
7A:complement(87225989..87238567)
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AA seq
956 aa
AA seq
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MAWFGNVSLGGFPDLAGAVSKLSESVKNIEKNFDSALGLEEKHDASDDGPGKWTSTSGRQ
GLFEPMMSFMGQKEEESASEQTVLAEFSQHPLTAEEHEMASSVPSSLPISKPTISDKGHE
DSITKDTDIISANATTMIEEPQSLDMNKGVEPNDLEVGTGTSLSRSKEEEDSSSIFQQKT
DGDIQASDNSRPEDPSQPITDCVELTVNNVLKKPEEAHHVLDSQGTDVIQETKAEQPLDK
ESSEHSEVLFAPENLGKETSVALPVSAEKYDHANEPSYNNVLVAIHTEQDHEMPSDSVTH
DTNASPKSLKNSRETDDEHESAKPSFISSDNALSSVDQPGEIEKVKQEMRMMESALKGAA
RQAQAKADEIAKLMNENEQLKSVIEDLKRKSKEDEIDALRDEYHQKVSSLERKVYALTRE
RDTLRREQSKKNDAAALLKEKDEIISQVMAEGEELSKKQAAQEATIRKLRAQIRELEEEK
QRLNSKLQVEETKVESMKRDKAATEKLLQETIERNQAELAAQKEFYTNALNAAKEAEALA
EERANSEAKVELENRLKEASEREAMLIQTLEELRQSLTRTEQQAAFKEEMLRRDMDDLQK
RYHDSELRYTEMITQVPESTRPLLRQIEAMQETAARRAEAWAGVEKALNSRLQEAEAKAA
AAEEKERTLNERLSQNLSRITVLETQIACIRTEQTQLSKSLEKERQRASESRQEYLAAME
EAATQEGRAKQFEEELKEIRSKHKRELQDEVVHRELLEKELERVGAAKDELEKTVSREAT
AIANQNTTKNLSFRNLSSAGSSGSMEESFFLQASLDSSDNPFSERRQSGEAPVSPYFLKS
MTQSAYEASLRHKDGEVASYISRLASLEAIRDSLAEELVKMTEQCEKLRAEAATLPGLRA
ELEALRRRHSAALELMGERDEELEELRADIIDLKEMYREQVDLLVDRLQTVKAQGP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttgggaatgtgtctttaggcggcttcccggatttggctggggccgtgtcg
aaactgagtgaaagcgtgaagaacatcgagaagaattttgatagtgctctcggattggag
gagaaacatgatgccagcgacgatggtcctggaaaatggacatcaacatctggtaggcaa
ggcctttttgaacctatgatgtccttcatggggcaaaaagaagaggaaagtgcttctgaa
caaacagtacttgctgaattttcacaacaccctttaacagctgaagaacatgaaatggcc
tcaagtgttccatcatctttacccatcagtaaaccgactatttctgacaagggacatgaa
gattctataactaaagatactgacatcatttctgctaatgccaccacaatgattgaagaa
cctcaaagccttgacatgaacaaaggtgttgagccaaatgatttggaagttggaacgggg
acttcattgtctagaagcaaggaagaagaagattcatcatctattttccaacagaaaaca
gatggtgacatccaagctagtgataactcaagaccagaagatccttcacaaccaattact
gactgtgtagaattaactgtcaacaatgtactaaaaaaacctgaagaggcacatcatgta
ctagattcacagggaactgatgtcatacaggagactaaggctgagcagcctctagataaa
gagtcttctgaacattctgaagtactttttgccccagaaaaccttggcaaagaaacttca
gttgcacttcctgttagtgcagagaagtatgatcatgccaatgaaccatcatataacaat
gttctagttgcaatccatactgagcaggatcatgaaatgccatctgactcagtaactcat
gataccaatgcatctcccaagtcattaaaaaactccagggaaacagatgatgaacatgaa
agtgccaagccttcatttatttcatcagataatgctttaagttcagtggatcagccaggg
gaaatagagaaggtaaaacaggaaatgcgaatgatggaatctgcattaaaaggtgccgct
aggcaagcccaggctaaagctgatgaaattgctaaactgatgaatgagaatgaacagttg
aaatctgttattgaggatctaaagaggaaatcgaaagaagatgaaatagatgcattacga
gatgaatatcatcaaaaggtgtcatctcttgaaagaaaggtttatgcacttaccagagaa
agggatacattaaggagagaacaaagcaaaaaaaatgatgctgctgctcttttgaaggag
aaagatgagataattagtcaagttatggctgaaggtgaagagctgtcaaaaaaacaggct
gctcaagaagcaactataaggaaactaagggcgcagattcgggagcttgaagaagaaaaa
caaagactcaattcaaagctccaggttgaggagacaaaagtagaaagtatgaagagagat
aaggcagctactgagaagttgctgcaggaaacaatagaaagaaatcaagcagaacttgct
gctcagaaggaattttatacaaatgcacttaatgcagccaaagaagctgaagccttagca
gaggaacgagctaacagtgaggccaaggtcgaacttgaaaatcgcctgaaggaagcaagt
gagcgtgaagctatgttgattcaaacgcttgaggagttgaggcagagtctgactagaaca
gagcagcaggcagcatttaaagaagaaatgctgagaagggatatggatgatcttcaaaaa
cgctaccatgatagtgaactccgctacactgaaatgatcactcaagttcctgagtcaact
cggccacttctaagacagattgaagctatgcaggagacagctgctagaagagctgaagcc
tgggctggtgtggaaaaagctctaaactctcgcttgcaggaggcagaagccaaagctgcc
gccgcagaagaaaaggaacgaaccctaaatgaacgtttatctcaaaacttatctcggatt
actgttcttgagactcagattgcttgtatcagaacagagcagacacaactgagtaagtca
cttgaaaaggaaaggcaaagggcatcggaaagcagacaagaatatctagcagcaatggaa
gaagctgctacacaagagggtcgtgccaagcaatttgaagaagaactcaaggagattaga
agtaaacacaaaagagagttacaagatgaggtggttcacagagaacttctggaaaaggag
cttgaaagggtaggagctgccaaagatgaactggaaaaaactgtttctcgtgaagctact
gcaattgcaaatcaaaatacaaccaaaaacttatcgtttaggaacctttcaagtgctggg
agttctggtagcatggaagaaagctttttcttgcaagcatccttggactcatcagataac
cctttttcagagaggagacaatctggggaagcaccagtttctccatattttctgaagagc
atgacacaaagtgcatatgaagcatcattgcgtcataaggatggtgaagttgcatcatat
atttcacgcttggcttcgttggaagctattcgtgattctcttgctgaagaactagtcaaa
atgacagagcagtgtgaaaaactgagagcagaagcagcaactttgcctgggttaagagca
gagttagaagccctgcggcgaaggcactcagcggcactagaacttatgggtgaacgtgat
gaagagttggaggaactccgcgctgatatcatcgacctgaaggagatgtaccgagagcaa
gtggatttgctcgtggacaggcttcagacagtaaaggctcaggggccatga
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