Zingiber officinale (ginger): 122001820
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Entry
122001820 CDS
T08725
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122001820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122001820
04121 Ubiquitin system [BR:
zof04121
]
122001820
03029 Mitochondrial biogenesis [BR:
zof03029
]
122001820
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122001820
Ubiquitin system [BR:
zof04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
122001820
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122001820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
122001820
NCBI-ProteinID:
XP_042412703
LinkDB
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Position
7A:95216600..95224692
Genome browser
AA seq
205 aa
AA seq
DB search
MDGGGFSSRRISFLLRRNLLPQGYWDLGACTNGMEHCLQAAGYLAIENIYHQNASEEGSC
EESISRDEEPFDEATLVSSNKNDMHIYDYHILYSFTFRVPVLYFRGYQSDGCPLKLVDIE
KDLPAYSLKLLRESKWAFITQEDHPYLHRPWYTLHPCGTGDWMKFLLCSDAPNKIPALHG
YLSAWLSVIGQVVGLRIPIGLFKSV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggtggattttcttcgaggcggatctccttcctcctccgtcgaaatcttctg
ccacaaggctattgggatttaggagcatgtaccaatgggatggaacattgtctccaagca
gcaggatacctagcaatcgaaaatatttatcatcaaaatgcaagtgaggaaggaagttgc
gaggaaagcatatccagggacgaagagccttttgatgaggctaccttggtttcaagtaac
aaaaatgacatgcatatctatgattaccacatactctacagcttcactttcagggttcct
gttctttatttccgtggatatcaatctgatggttgtcctttgaagttagttgacatcgag
aaagacctgcctgcttactctctcaaactacttagggaatcaaaatgggcattcatcacc
caggaggatcatccttacctccatcgaccatggtatactttacatccctgtggtacaggt
gattggatgaagtttttgctttgcagtgatgctccaaataagatccctgctcttcatggc
tatttatctgcgtggctatcagtcataggtcaggttgttgggttgagaattcctattggg
ttatttaaatcagtgtag
DBGET
integrated database retrieval system
