Zingiber officinale (ginger): 122001832
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Entry
122001832 CDS
T08725
Name
(RefSeq) DNA-3-methyladenine glycosylase 1-like
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122001832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122001832
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
122001832
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122001832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
122001832
NCBI-ProteinID:
XP_042412722
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All DBs
Position
7A:complement(96228917..96238103)
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AA seq
365 aa
AA seq
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MPPPSPPPATRFPNSSASASASASSAADRFLSAFTTPMEDVPRRSAQSTSPSSSSPNHLL
SSDPSAAAASSALTITNPTVTDSAISTRPRKARRVSSDDASRKTPSSAPRLPIRVIPRPL
SADGEIDVAFRHLRAADPHLAPVIDSHEPPSLQCLHPPFHALTRSILYQQLAFKAGSSVY
TRFLSLCGGEESVVPEAVLALTPHQLRQIGVSARKASYLHDLARKYHSGILSDAAIVSMD
DKSLFTMLTMVKGIGAWSVHMFMIFSLHRPDVLPVGDLGVRKGVQMLYGLEEVPRPSQME
QLCEHWRPYRSVGSWYMWRLVEAKGTPTLASSSAEGGTLDMADMGGGTMQQPQLIDPVQM
LPGLG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaccgtcgccgccgcctgcaacccgattcccaaactcctccgcctccgcctcc
gcctctgcttcttccgctgccgatcgcttcctctccgccttcaccactcccatggaagac
gtgcctcgccgttccgcccaatctacatcgccctcttcctcttcccctaaccacctactg
tcatccgacccatccgccgccgccgcctcttcagccctaacaatcaccaaccctaccgtc
acagactccgcaatctccacccgcccccgaaaggcccgaagggtttcctccgacgacgct
tccaggaaaacaccctcttccgctccccgcctccccatccgcgtcatcccccgtccgctc
tccgccgacggcgaaatcgacgtcgccttccgccacctacgcgcagctgacccccacctc
gcccccgtcatcgactcgcatgagcctccctccctccagtgtctccatccgcccttccac
gccctcacacgcagcatcctctaccagcagctcgccttcaaggccggatcgtccgtgtat
acccgctttctgtccctttgtggcggagaggaaagcgttgtccctgaggctgtcctcgcc
ctcaccccgcatcaactgcgccagatcggtgtctccgcccgcaaggcctcctacctccac
gacctcgcccgaaagtaccacagcggcatcctttccgacgctgccattgtatccatggat
gacaagtccctcttcaccatgctcaccatggtcaagggcattggcgcctggtccgttcac
atgttcatgatcttctcactccaccggccggatgtccttcctgtcggagaccttggtgtt
cgaaagggagtgcagatgctttatggtctcgaggaggttccacggccttcgcaaatggag
cagctttgtgagcactggagaccgtatcgctctgttgggtcttggtacatgtggcgcctt
gtggaggcgaagggcacacccactctggcttcatcaagtgctgaaggtggaacacttgat
atggctgacatgggaggtggaacgatgcagcaaccacagctaattgatccagttcagatg
cttcctggtcttggatga
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integrated database retrieval system
